Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03281 ATGGCTCTGTTTACGATAAAGCTTCCCAGTACTTCATCAACTAGCTTAGTACTCAGTATAATTTTATTTATAATTTTATGGTATGGAACGAATGCATTAGTGAAACTACCACCAAATGTAACAATTCCAGCACTCATAACTTTTGGAGATTCGATTATGGATACAGGAAACAACAATTACATCAACACAATTGTCAAGTGCAATTTTCCTCCTTATGGTCAAGATTTTGTGGGAGGAATTCCAACCGGTCGATTTTGCAACGGAAAAATTCCGTCGGACTTGATAGCTGAAGAATTGGGTATTAAGGAGCTTTTACCGGCTTATTTGGATCCAAATCTCAAACCAAGCGACCTTGTTACTGGAGTATGCTTTGCTTCTGCTGCTTCCGGATACGATCCTTTAACACCTAAAATAGTGTCAGTGATTTCAATGTCGGATCAAGTAGAGATGTTCAAAGAATACATAGGGAAGCTTAAAGGTATAGTTGGAGAAGAGAAGACAAATTACATCTTAGCCAACACTCTTTACCTTGTGGTAGCTGGAAGTAATGACCTTGCCAACACTTATTTTACTATTCGAACTAGACAATTGCACTATGATGTTCCTGCTTATACTGACCTTATGCTCAATAAAGCCTCTGATTTCATTAAGGAAATATATCAACTTGGAGCACGTAGAATTGGAGTATTCAGTGTAGCACCTATTGGGTATTTACCATCAGTGAGGACTCTAAGTGGGGGTGTATTTAGAAAGTCCAATGAGAAATACAATGAAGCAGCAAGGTTATTCAATTCCAAACTGTCCAAGGAATTGGACTTCCTCAACTCTAACTTGCCCAACAGTAGGATTGTCTATATTGATATTTACACCCCTCTACTTGACATCATTGTCAACCCCAAAAAATATGGTAATGTTTTTTCTTTACGACAAAAAAAATGGTAA 942 0.3737 MALFTIKLPSTSSTSLVLSIILFIILWYGTNALVKLPPNVTIPALITFGDSIMDTGNNNYINTIVKCNFPPYGQDFVGGIPTGRFCNGKIPSDLIAEELGIKELLPAYLDPNLKPSDLVTGVCFASAASGYDPLTPKIVSVISMSDQVEMFKEYIGKLKGIVGEEKTNYILANTLYLVVAGSNDLANTYFTIRTRQLHYDVPAYTDLMLNKASDFIKEIYQLGARRIGVFSVAPIGYLPSVRTLSGGVFRKSNEKYNEAARLFNSKLSKELDFLNSNLPNSRIVYIDIYTPLLDIIVNPKKYGNVFSLRQKKW 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03281 313 Pfam GDSL-like Lipase/Acylhydrolase 46 300 IPR001087 GO:0016788
Car05g03281 313 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 12 304 - -
Car05g03281 313 CDD SGNH_plant_lipase_like 43 303 IPR035669 -
Car05g03281 313 Gene3D SGNH hydrolase 35 309 IPR036514 -
Car05g03281 313 PANTHER GDSL ESTERASE/LIPASE EXL3 12 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03281 Car-Chr5 77537476 77543076 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03281 14 303 Pollen Coat Proteome AT1G75910 40.273 7.08e-66 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03281 - - cam:105851132 614.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03281 05 77537476 77543076 Car05g03281 05 77537476 77543076 ECH
Car04g03601 04 65356262 65375720 Car05g03281 05 77537476 77543076 PCT
Car05g03281 05 77537476 77543076 Car04g03598 04 65236789 65239807 PCT