Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03266 ATGCTTATAACATTTGTATTGTTGGGCAAGTATTTGGAATGTCTAGCAAAGGGAAAGACGTCTGATGCCATTAAGAAGTTAGTAGAACTCACTCCTACAACAGATTTACTGGTTGTTAAAGACAAAGATGGTAGATCTATTGAAGAAAGAGAAAATGATTCCTTGCTTATTCAAACTATTGACACATTAAAAGTTCTTCATGGTACAAAGATTCCTACTGATGGCATTGTTACTTGGGACTCAAGTTATGTAAATGAGAGTATGGTGACTGGTGAATCTATACCTGTTTTGAAGGAGATCAATACCTTTGTCATTGGAGGTACAATCAATTGGCATGGTGTCCTTCACATCCAAGCTACTAAAGTAGGATCTAATACAATTTTGAGGATCTGA 393 0.3588 MLITFVLLGKYLECLAKGKTSDAIKKLVELTPTTDLLVVKDKDGRSIEERENDSLLIQTIDTLKVLHGTKIPTDGIVTWDSSYVNESMVTGESIPVLKEINTFVIGGTINWHGVLHIQATKVGSNTILRI 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03266 130 Gene3D - 17 130 - -
Car05g03266 130 PANTHER ATP7, ISOFORM B 1 128 - -
Car05g03266 130 PANTHER HEAVY METAL P-TYPE ATPASE 1 128 - -
Car05g03266 130 SUPERFAMILY Calcium ATPase, transduction domain A 61 128 IPR008250 -
Car05g03266 130 Pfam E1-E2 ATPase 43 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03266 Car-Chr5 77428938 77429941 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03266 1 128 Primary Pumps ATPases AT5G44790 69.531 8.70e-53 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03266 K17686 - cam:101507723 257.684