Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03259 ATGGCTTTAAGAAAATCAACTAAACTTCCTCAAACACCACTAATTAAACAAATCCTTAAAAGATGTTCGAGTTTAGGGAAGAAACATGGCCTTCGTTTGGATGTTCCTAAGGGTCATTTTGTTGTGTATGTTGGTGAAAATAGAAGCAGGTACATTGTTCCAATTTCTTTCTTAAGTCGACCAGAGTTTCAAAACCTTCTCCATAAAGCTGAAGAAGAGTTTGGTTTTGATCATGATATGGGTCTCACTATTCCATGTGACCAACATGTTTTTGAGTCTCTTACATCCATGCTCAGATGA 300 0.3667 MALRKSTKLPQTPLIKQILKRCSSLGKKHGLRLDVPKGHFVVYVGENRSRYIVPISFLSRPEFQNLLHKAEEEFGFDHDMGLTIPCDQHVFESLTSMLR 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03259 99 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 99 IPR003676 GO:0009733
Car05g03259 99 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 6 99 - -
Car05g03259 99 Pfam Auxin responsive protein 29 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03259 Car-Chr5 77344991 77345470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03259 34 94 Calmodulin-binding Proteins AT3G43120 55.738 8.55e-19 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03259 K14488 - tcc:18591528 172.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03259 05 77344991 77345470 Car05g03259 05 77344991 77345470 ECH