Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03243 ATGGGAAATGAACGTTATTGTTTTCCCACAATGGATCTGCTACGTTCAGAGCCTATGCAACTTGTTCAATTGATCATTCCAATTGAATCAGCTCATCGATCCATCTCTTACATTGGTGATCTCGCTCTCTTTCAATTCAAAGATCTTAATGAAGACAAAAGTCCATTCCAACGAACTTATGCTTCTCAGGTTAAAAGATGTGGAGAAATGGCTCGTACATTACGGTTATTTAAGGAACAAATGATGAAGGCAGGTATATCACCTTCAACACGGTCAACAAGAGATGATGGTCTTGATCTGGAATACTTGGAGGTTAAACTAGCAGAACTTGAAGCTGAGCTACTTGAGATGAATGCAAATAATGAGAAGTTGCAACATACTTACAATGAGCTTATTGAGTATAAACTTGTTCTAGAGAAGGTTGGAGAGTTTTTCCCTTCAGCACAAAATAATGCTGTAGCTCGCCAAAGAGAGCTTCAAGTGCAACCAATTGTTGAAGGGTCTATTGACAGCCCATTATTAATGGAACAAGAGACAACATCATATCCAGTAAAACAAATTAAACTAGGGTATATAAGTGGTCTTGTTTCAAGGGAAAAATCAATTCCTTTTGAAAGAGTTTTATTTCGTGCTACAAGGGGAAATGTATATCTGAAACAGACTGTGGTTGAACATCCTATTTTAGATCCTTTGTCAGGAGAAAAGGTTCACAAAAATGTATTTGTTATATTTTATTCTGGAGAGAGAGTTAAAAGTAAAATTCTCAAAATTTGCGATGCTTTTGGAGCAAATCGTTATCCTTTTTCAGATGACTTGGGTAAACAATTTCAGATGTTGACAGAGGTATCAGGAAGACTTGGAGAATTAAAGGCAACTATTGATGCAGGTTTGCTTCACCGGAGCACTTTGTTGCAGACAATTGGATATCAATTTGAGCAGTGGAACCTTCTGTTAAAGAAGGAAAAATCCATTTATCACACTCTAAATATGCTAAGCATTAATGTGACAAAGAAATGTCTCCTTGCAGAAGGTTGGTGTCCTGTTTTTGCAACAAATCAGATTCAAAAAGTATTATTGCGGGCAACTATGGACTGTAACTCTCAAGTTGAGTCAATATTTCAGGTTTTACAGACAAAGGAATTACCACCCACTTATTTTTGCACAAATAAGTTTACTTCTTCATTTCAAGAAATTGTAGATGCCTATGGAATTGCCAAGTACCAGGAAGCAAATCCCGGTGTATACACAATCATCACATTTCCATTCCTTTTTGCTGTAATGTTTGGTGATTGGGGTCATGGCATATGCTTATTACTAGCGACTTTGTATTTCATAATCAACGAGAAAAAGTTTTCTTGTCAGAAACTTGGAGACATATTAGAAATGGTTTTCGGTGGAAGATATATTATTATGATGATGGCACTCTTCTCAATCTACACTGGATTGATATATAATGAATTTTTCTCCATTCCATTTGAATTATTTGGACCAACTGCCTATGGATGTCGTGATCCTTCATGCAGGGATGCAACTACAATAGGTTTGATAAAAATGCGTGACACTTACCCATTTGGTGTGGATCCTAAATGGCATGGTACTCGGAGCGAACTCCCATTTCTCAACTCTTTAAAAATGAAGATGTCAATTCTATTGGGAGTATCCCAGATGAACCTTGGAATCGTCCTGAGTTACTATAATGCGAAATATTTTGAAAACAGCATAAATACTTGGTACCAGTTTGTTCCCCAAATGATATTCTTGAACAGCCTATTTGGATACCTTTCACTTCTCATAATTGTAAAATGGTGCTGTGGATCACAAGCTGACTTGTATCATGTGATGATATACATGTTTCTAAGTCCAACTGATGATTTGGGTGAAAACCAGCTCTTTGTTGGCCAACAGTTTCTTCAAATTACATTACTACTTTTGGCACTCATTGCTGTACCATGGATGTTAATACCAAAGCCATTTCTCCTGAAGAAACAACATGAAGAAAGACATCGGGGTCAATCTTACTCTTTGCTCTATAGCGGGGATGATCCTCTAGAATCAAAGTCACATGGTATTCATCATAACCATGAGGAGTTTGAATTTAGCGAGGTTTTTGTCCACCAACTTATACATACAATAGAATTTGTGCTTGGAGCTGTGTCTAATACGGCTTCATACCTTCGCTTATGGGCCCTCAGCCTAGCTCATTCAGAGTTGTCAAGCGTTTTCTATGACAAAGTTCTACTACTTGCTTGGGGGTATAACAACACCATTGTTCTCATTGTTGGTGTTATTGTTTTTATATGTGCAACTGTTGGTGTCTTACTAGTAATGGAAAGTCTAAGTGCTTTCTTACATGCTTTGAGACTTCACTGGGTTGAGTTCCAGAACAAATTTTATGAGGGGGATGGTTACAAGTTCTTCCCATTTTCATTTACATCCCTTGCTGATGAAGATGGTTTGTAG 2460 0.3732 MGNERYCFPTMDLLRSEPMQLVQLIIPIESAHRSISYIGDLALFQFKDLNEDKSPFQRTYASQVKRCGEMARTLRLFKEQMMKAGISPSTRSTRDDGLDLEYLEVKLAELEAELLEMNANNEKLQHTYNELIEYKLVLEKVGEFFPSAQNNAVARQRELQVQPIVEGSIDSPLLMEQETTSYPVKQIKLGYISGLVSREKSIPFERVLFRATRGNVYLKQTVVEHPILDPLSGEKVHKNVFVIFYSGERVKSKILKICDAFGANRYPFSDDLGKQFQMLTEVSGRLGELKATIDAGLLHRSTLLQTIGYQFEQWNLLLKKEKSIYHTLNMLSINVTKKCLLAEGWCPVFATNQIQKVLLRATMDCNSQVESIFQVLQTKELPPTYFCTNKFTSSFQEIVDAYGIAKYQEANPGVYTIITFPFLFAVMFGDWGHGICLLLATLYFIINEKKFSCQKLGDILEMVFGGRYIIMMMALFSIYTGLIYNEFFSIPFELFGPTAYGCRDPSCRDATTIGLIKMRDTYPFGVDPKWHGTRSELPFLNSLKMKMSILLGVSQMNLGIVLSYYNAKYFENSINTWYQFVPQMIFLNSLFGYLSLLIIVKWCCGSQADLYHVMIYMFLSPTDDLGENQLFVGQQFLQITLLLLALIAVPWMLIPKPFLLKKQHEERHRGQSYSLLYSGDDPLESKSHGIHHNHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLLAWGYNNTIVLIVGVIVFICATVGVLLVMESLSAFLHALRLHWVEFQNKFYEGDGYKFFPFSFTSLADEDGL 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03243 819 Pfam V-type ATPase 116kDa subunit family 37 810 IPR002490 GO:0033179|GO:0046961|GO:1902600
Car05g03243 819 Coils Coil 100 127 - -
Car05g03243 819 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 11 819 - -
Car05g03243 819 PANTHER VACUOLAR PROTON ATPASES 11 819 IPR002490 GO:0033179|GO:0046961|GO:1902600
Car05g03243 819 PIRSF ATP6V0A1 9 818 IPR026028 GO:0000220|GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03243 Car-Chr5 77190367 77195706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03243 11 817 Primary Pumps ATPases(2) AT2G21410 72.491 0.0 1249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03243 K02154 - gmx:100805813 1375.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03243 05 77190367 77195706 Car05g03243 05 77190367 77195706 ECH