Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03228 ATGGATGAAAGAAAAAACAAGAGAAAACAATCGAATCGAGAATCAGCAAAAAGATCAAGGATGCGAAAACAGCAACATGTAGATGAAATGACAAACCAGGTTTCTCAACTGAGAAAAGAAAACAATGAAATTGTCAAGAGCATAAATATCACAACACAACACTATTTGAATGTTGAGACAGAGAATTCAATTTTGAGAGCTCAAATGAATGAGCTTAGTCAAAGGCTTCAATCACTTAATAATATTATTGGACTCATCAACACAAACACAACAAGCACCAATACTGGGTCATCTTCTTATACGAGGGATTGTTATGAAACAAGTGCACAAAATATCATGAATATGGTTTCACATAGCCAACCTATTACGACTTCTGCGGATATTTTTCAGTGGTGA 396 0.346 MDERKNKRKQSNRESAKRSRMRKQQHVDEMTNQVSQLRKENNEIVKSINITTQHYLNVETENSILRAQMNELSQRLQSLNNIIGLINTNTTSTNTGSSSYTRDCYETSAQNIMNMVSHSQPITTSADIFQW 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03228 131 Pfam bZIP transcription factor 4 59 IPR004827 GO:0003700|GO:0006355
Car05g03228 131 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 2 65 IPR004827 GO:0003700|GO:0006355
Car05g03228 131 Coils Coil 20 47 - -
Car05g03228 131 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 7 22 IPR004827 GO:0003700|GO:0006355
Car05g03228 131 PANTHER BZIP TRANSCRIPTION FACTOR 1 129 - -
Car05g03228 131 SUPERFAMILY Leucine zipper domain 4 57 IPR046347 GO:0003700|GO:0006355
Car05g03228 131 Gene3D - 2 57 - -
Car05g03228 131 Coils Coil 55 82 - -
Car05g03228 131 MobiDBLite consensus disorder prediction 1 39 - -
Car05g03228 131 SMART brlzneu 1 64 IPR004827 GO:0003700|GO:0006355
Car05g03228 131 CDD bZIP_plant_GBF1 5 55 IPR045314 GO:0003700|GO:0006355
Car05g03228 131 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03228 Car-Chr5 77047702 77049080 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03228 1 131 bZIP Transcription Factor Family AT4G34590 48.905 4.97e-35 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car05g03228 bZIP_1 1.5e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03228 K25786 - cam:105851064 192.971