Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03225 atgtcaaaatctttggaactccctgattgtatctatccatgtcacccagtaactaatattgcaccaagtgctccaactccaaaacattctctctatctttctaatcttgatgaccaaaagttccttagattttccattaagtatttatacatcttcaagaaatctgtgagcttgaatcgtttgaaatcttctctgtctagagttctcgtggattattaccctttagctggaagattgaggagatctttctctttggatgatcacaagcttgaagtagattgcaatggagaaggtgctgtttttgttgaggcttttatggatatcactgctgaagcattaattgaaccttctaagttaccaaataagtcatggaggaagtttttgtataaggtggaagctcagagtttcttagatgttcctcctcttatagttcagATAACAACTCTCCGTTGCGGGGGAATGATTATGTGCCTCGCAATCAACCACTGTCTATGTGATGGCATTGGCACATCTCAATTTCTACATGCTTGGGCACAACACAACACTACAACTCAAGCTGAATTGACCATTACACCCTTCCATTCACGACACATGTTGAAGCCACGTCACCCCCCAATAGTAAATTACCATAGTCCAGGATACACCAGAACAGAACTAACCCCTCAAGTGAACCTCCTCAAGTTATTACAGTCACAACCCTTAGTACCCACATCATTCACCTTTAATCCCTCCAATATTCTCAATCTGAAGAAACAATGTGTACCGTCACTAAAATGCACTACTTTTGAAGTAGTTGCGGCACACACGTGGCGCTCTTGGATTCGATCAATGAACTTATCCTTACCCTCTAATTTAGTAGTGAAACTTCTTTTCTCTGTTAACGTCCGCACCGTATTAAACCTACCAAAGGAATATTACGGAAATGGGTTTCTATTAGCGTGTGCGGAAAGTACTATAGAAGACTTAATTGAGAATAACTTGCACCATAGTGTGAAATTAGTGCAAAAGGCCAAATCAACTGTGAATGATGAGGAATACATAAGATCAACGATTGATTTATTGGAGGATAAGATGGTAAAAACCGACGTTTCAACCACTTTGGTTATATCACAGTGGTCTAAATTAGGGCTGGAAATGGTGGATTTTGGAGAAGGGAAATCATTGCACATGGGTCCTTTAACAAGTGATGTTTATTGCTTGTTTTTACCGGTTATTGCCGGTGATGCTAATGATGTGAGAGTGCTTCTGTCTGTGCCAGATAGTATGGTTCAAACTTTTCAATATCAAATGAATAAAAGCTGGGAAGAGGAAAAAGAAAATGGATATCATAAGCATCAAAATCCACTTTTCTAA 1353 0.2705 MSKSLELPDCIYPCHPVTNIAPSAPTPKHSLYLSNLDDQKFLRFSIKYLYIFKKSVSLNRLKSSLSRVLVDYYPLAGRLRRSFSLDDHKLEVDCNGEGAVFVEAFMDITAEALIEPSKLPNKSWRKFLYKVEAQSFLDVPPLIVQITTLRCGGMIMCLAINHCLCDGIGTSQFLHAWAQHNTTTQAELTITPFHSRHMLKPRHPPIVNYHSPGYTRTELTPQVNLLKLLQSQPLVPTSFTFNPSNILNLKKQCVPSLKCTTFEVVAAHTWRSWIRSMNLSLPSNLVVKLLFSVNVRTVLNLPKEYYGNGFLLACAESTIEDLIENNLHHSVKLVQKAKSTVNDEEYIRSTIDLLEDKMVKTDVSTTLVISQWSKLGLEMVDFGEGKSLHMGPLTSDVYCLFLPVIAGDANDVRVLLSVPDSMVQTFQYQMNKSWEEEKENGYHKHQNPLF 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03225 450 Gene3D - 232 435 IPR023213 -
Car05g03225 450 Gene3D - 15 216 IPR023213 -
Car05g03225 450 PANTHER BNAC03G58010D PROTEIN 17 434 - -
Car05g03225 450 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 17 434 - -
Car05g03225 450 Pfam Transferase family 19 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03225 Car-Chr5 77017411 77020005 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03225 18 392 Monolignol Biosynthesis Gene Families AT5G48930 27.160 4.93e-39 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03225 - - gmx:100810619 667.537