Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03223 atgtcaaaatctttggaactccctgattgtatctatccatgtcacccagtaactaatattgcaccaagtgctccaactccaaaacattctctctatctttctaatcttgatgaccaaaagttccttagattttccattaagtatttatacatcttcaagaaatctgtgagcttgaatcgtttgaaatcttctctgtctagagttctcgtggattattaccctttagctggaagattgaggagatctttctctttggatgatcacaagcttgaagtagattgcaatggagaaggtgctgtttttgttgaggcttttatggatatcactgctgaagcattaattgaaccttctaagttaccaaataagtcatggaggaagtttttgtataaggtggaagctcagagtttcttagatgttcctcctcttatagttcagATAACAACTCTCCGTTGCGGGGGAATGATTATGTGCCTCGCAATCAACCACTGTCTATGTGATGGCATTGGCACATCTCAATTTCTACATGCTTGGGCACAACACAACACTACAACTCAAGCTGAATTGACCATTACACCCTTCCATTCACGACACATGTTGAAGCCACGTCACCCCCCAATAGTAAATTACCATAGTCCAGGATACACCAGAACAGAACTAACCCCTCAAGTGAACCTCCTCAAGTTATTACAGTCACAACCCTTAGTACCCACATCATTCACCTTTAATCCCTCCAATATTCTCAATCTGAAGAAACAATGTGTACCGTCACTAAAATGCACTACTTTTGAAGTAGTTGCGGCACACACGTGGCGCTCTTGGATTCGATCAATGAACTTATCCTTACCCTCTAATTTAGTAGTGAAACTTCTTTTCTCTGTTAACGTCCGCACCGTATTAAACCTACCAAAGGAATATTACGGAAATGGGTTTCTATTAGCGTGTGCGGAAAGTACTATAGAAGACTTAATTGAGAATAACTTGCACCATAGTGTGAAATTAGTGCAAAAGGCCAAATCAACTGTGAATGATGAGGAATACATAAGATCAACGATTGATTTATTGGAGGATAAGATGGTAAAAACCGACGTTTCAACCACTTTGGTTATATCACAGTGGTCTAAATTAGGGCTGGAAATGGTGGATTTTGGAGAAGGGAAATCATTGCACATGGGTCCTTTAACAAGTGATGTTTATTGCTTGTTTTTACCGGTTATTGCCGGTGATGCTAATGATGTGAGAGTGCTTCTGTCTGTGCCAGATAGTATGGTTCAAACTTTTCAATATCAAATGAATAAAAGCTGGGAAGAGGAAAAAGAAAATGGATATCATAAGCATCAAAATCCACTTTTCTAA 1353 0.2705 MSKSLELPDCIYPCHPVTNIAPSAPTPKHSLYLSNLDDQKFLRFSIKYLYIFKKSVSLNRLKSSLSRVLVDYYPLAGRLRRSFSLDDHKLEVDCNGEGAVFVEAFMDITAEALIEPSKLPNKSWRKFLYKVEAQSFLDVPPLIVQITTLRCGGMIMCLAINHCLCDGIGTSQFLHAWAQHNTTTQAELTITPFHSRHMLKPRHPPIVNYHSPGYTRTELTPQVNLLKLLQSQPLVPTSFTFNPSNILNLKKQCVPSLKCTTFEVVAAHTWRSWIRSMNLSLPSNLVVKLLFSVNVRTVLNLPKEYYGNGFLLACAESTIEDLIENNLHHSVKLVQKAKSTVNDEEYIRSTIDLLEDKMVKTDVSTTLVISQWSKLGLEMVDFGEGKSLHMGPLTSDVYCLFLPVIAGDANDVRVLLSVPDSMVQTFQYQMNKSWEEEKENGYHKHQNPLF 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03223 450 Gene3D - 232 435 IPR023213 -
Car05g03223 450 Gene3D - 15 216 IPR023213 -
Car05g03223 450 PANTHER BNAC03G58010D PROTEIN 17 434 - -
Car05g03223 450 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 17 434 - -
Car05g03223 450 Pfam Transferase family 19 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03223 Car-Chr5 76986749 76989130 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03223 18 392 Monolignol Biosynthesis Gene Families AT5G48930 27.160 4.93e-39 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03223 - - gmx:100810619 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03223 05 76986749 76989130 Car05g03223 05 76986749 76989130 ECH