Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03222 ATGATTATGGAATCTACCACCAATCTCCAACAAGACCAACCATCCCCTGTTGTTGACCcttcttcttcttctgcttcttcttcttTATCCAATTCCACTCCATCCTATGCAACAATCCACTCTTGGAACCCTAACATCACTTTGAATAATGCAGGGAACTTCAACTCAAACCTCCAAGAAGCTACTAATCAAAGATCAAGATCATGTTTAATAGCACACAAGAGTGATATGATTCAAGATTTAGGTTATCATAATCAGTGGACAAGTGATGAATTTTCAAAGGAAGAGATCTCATTTGCTAATTTCCCCAAATTCACAGAAATGCTTAATTACACAACTCCTAATAATTCAACCATGCTCAAGACTCTTTTAACTGAACAAGACTTTTATAGTTCTCAAAGTTATAATAATCCTAATTTTGGAGGCACAAATCACATTGCAAGTAGCCAGATTCACCCAAGTATAAACATCTCAAACTTGAATCACTACTCTTCCTCCACAACTTTGGATATGAACATGCAGTCCTTAGATCTATTAACCACTTCACCGACATCATTTACTAATACTTCTCAGCCTCATTTTGGTAAATTTACTCATCATGACAACAACCTTTCTTTTCATCTTCATCCTATGCACCACTCCTCTTCTAGTAACTCTAGTAATCAATCGCTATTGAGCAATATTGGCACGGTAGAAACAAAGAGAGGGTGCACCTTGATGGAGTCAAAAGTTTCTCAATCTCAAACAGCATTGAAGAAATCACGATCTTCATCCGAATCACGCCCTTCGTGCCCACCCTTTAAGGTTAGGAAAGAGAAATTAGGAGATAGGATTGCGGCTCTTCAGCAGTTGGTAGCTCCTTTCGGAAAGACAGACACGGCATCCGTACTAATGGAAGCTATTGGATACATTAAATTCCTTCAAGGCCAAGTCGAGACATTGAGCGTTCCGTATATGAAGTTATCACAAAACCAAAACAATAGAGTGATGAGAGGGGATTCAACAACATGCGACATAAATGGAGAACCAAAGCAAGATTTGAGAAGTCGAGGTCTATGTCTCGTGCCATTGTCATGTATGTCATACATAGTAACTGATGGCGGCACTGAACCGTGGCAACAACACCATAACTTTGGTAGACCAACTTAA 1149 0.3829 MIMESTTNLQQDQPSPVVDPSSSSASSSLSNSTPSYATIHSWNPNITLNNAGNFNSNLQEATNQRSRSCLIAHKSDMIQDLGYHNQWTSDEFSKEEISFANFPKFTEMLNYTTPNNSTMLKTLLTEQDFYSSQSYNNPNFGGTNHIASSQIHPSINISNLNHYSSSTTLDMNMQSLDLLTTSPTSFTNTSQPHFGKFTHHDNNLSFHLHPMHHSSSSNSSNQSLLSNIGTVETKRGCTLMESKVSQSQTALKKSRSSSESRPSCPPFKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQGQVETLSVPYMKLSQNQNNRVMRGDSTTCDINGEPKQDLRSRGLCLVPLSCMSYIVTDGGTEPWQQHHNFGRPT 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03222 382 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 268 323 IPR036638 GO:0046983
Car05g03222 382 MobiDBLite consensus disorder prediction 1 30 - -
Car05g03222 382 CDD bHLH_AtbHLH_like 267 315 IPR045239 -
Car05g03222 382 Gene3D - 268 331 IPR036638 GO:0046983
Car05g03222 382 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 258 307 IPR011598 GO:0046983
Car05g03222 382 MobiDBLite consensus disorder prediction 241 268 - -
Car05g03222 382 MobiDBLite consensus disorder prediction 241 263 - -
Car05g03222 382 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 124 366 - -
Car05g03222 382 PANTHER OS01G0105700 PROTEIN 124 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03222 Car-Chr5 76958005 76961601 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03222 19 362 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 38.571 1.74e-54 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03222 - - mtr:MTR_3g112170 427.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03222 05 76958005 76961601 Car05g03222 05 76958005 76961601 ECH