Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03201 ATGGGTTGGACAAGAGAAGAGAACATGCGTTTTGAGGATGCTCTTGCGGTGTACGGTCCAGAAGATCCCAACCGGTGGCAAAAAGTGGCAAACGCTGTTGGTGGAAAATCAGTAAAAGAGGTTAAAATGCACTATGAGATCCTTATGGAAGATGTCACTCGAATAGAGCGTGATCAAATCCCACTACCCATTTACAGGGGGGGTGCTGCTATCAATTTCAAAGGAACTCAATTTGTCGATCACCAAATTAGCAAGCGAATGAGGAATCTGAATATCCGTTAA 282 0.4397 MGWTREENMRFEDALAVYGPEDPNRWQKVANAVGGKSVKEVKMHYEILMEDVTRIERDQIPLPIYRGGAAINFKGTQFVDHQISKRMRNLNIR 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03201 93 SUPERFAMILY Homeodomain-like 3 56 IPR009057 -
Car05g03201 93 Pfam Myb-like DNA-binding domain 3 45 IPR001005 -
Car05g03201 93 CDD SANT 3 45 IPR001005 -
Car05g03201 93 ProSiteProfiles SANT domain profile. 1 53 IPR017884 -
Car05g03201 93 ProSiteProfiles Myb-like domain profile. 1 49 IPR001005 -
Car05g03201 93 Gene3D - 2 49 - -
Car05g03201 93 SMART sant 3 51 IPR001005 -
Car05g03201 93 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 2 66 IPR044636 GO:0003700
Car05g03201 93 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03201 Car-Chr5 76832813 76833762 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Car05g03201 Myb_DNA-binding 3.6e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03201 - - cam:101502028 194.126