Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03192 ATGGCTACACAGATGAGCAAAAAGCGAAAGTTCGTCGCTGACGGAGTTTTTTTCGCTGAATTGAATGAGGTTTTGACAAGAGAACTTGCTGAGGATGGTTATTCTGGTGTAGAGGTTAGGGTTACCCCGATGCGCACCGAAATCATCATCAGAGCTACTCGTACCCAAGCTGTTCTTGGTGAGAAGGGAAGGAGGATTAGAGAACTTACCTCAGTGGTACAGAAGAGGTTTAAGTTTCCTGAGAACAGTGTTGAGCTTTATGCTGAGAAAGTTAACAACAGAGGACTTTGTGCAATTGCTCAGGCTGAGTCTCTTCGCTACAAGCTCCTCGGTGGTCTTGCTGTTCGCAGGACAGATTTTTGTTCCGTGATTAAGTACAGAAAGGCCACTTTGCTCTCACGTTAG 405 0.4568 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRTDFCSVIKYRKATLLSR 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03192 134 PANTHER 30S/40S RIBOSOMAL PROTEIN S3 2 121 - -
Car05g03192 134 CDD 40S_S3_KH 15 95 - -
Car05g03192 134 SUPERFAMILY Prokaryotic type KH domain (KH-domain type II) 10 99 IPR009019 GO:0003723
Car05g03192 134 Gene3D - 93 126 IPR036419 -
Car05g03192 134 Gene3D - 1 91 IPR015946 -
Car05g03192 134 PANTHER 40S RIBOSOMAL PROTEIN S3-2-LIKE 2 121 - -
Car05g03192 134 ProSiteProfiles Type-2 KH domain profile. 21 92 IPR004044 GO:0003723
Car05g03192 134 Pfam KH domain 20 93 IPR004044 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03192 Car-Chr5 76770858 76771823 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03192 1 120 Cytoplasmic Ribosomal Protein Gene Family AT2G31610 92.500 1.48e-76 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03192 K02985 - gmx:100795045 225.713