Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03150 ATGGCGAATCCCGAAGCTCACCGTCATCACAATAGCCAACACCACCGCTCCAAATCTAAACCATCATCTTCAGCGGGTCGACCCAAACCTCGTCCCAAACCTAGGGTTTCACTTATCAAGCTTCTTCGAGTAGCGTCAGTTGCCGGTGGAATTCAATTTGGATGGGCCTTACAGCTCTCTCTTTTGACACCCTACGTGCAGCAGCTCGGAATCCCGCACGCTTGGGCTAGCATCATATGGCTCTGTGGGCCTCTCTCTGGGCTTCTTGTTCAGCCTTTGGTTGGACACTTGAGTGATCGGTGTACCAGTCGATTCGGTCGTCGGAGACCGTTTATTTTGGCCGGAGCTGTGTCGATTATTATCTCTGTTCTCATCATTGGTCATGCTGCTGATTTGGGATGGAAGTTCGGTGATACGAAGAAACATCGGCATGCTGCTGTGGGTTTTTTTGTGTTCGGGTTTTGGATTTTGGATGTTGCTAATAATGTCACTCAAGGTCCTTGTAGGGCATTGCTTGGTGATCTCACTGGCAAGGATCATCGAAGGACACGTGTTGCAAATGCTTATTTCTCCCTGTTTATGGCTATTGGTAACATTCTTGGTTATGCAACTGGATCATACAGTGGTTGGTACAAGGTCTTTCCTTTCACACTTACCCCTGCATGCAATATTAGTTGTGCAAATCTCAAGTCTGCTTTCTTTCTCGACATTGGTTTCATTATCATCACCACCTACATCAGTATCATGGCAGCTAATGAAGTGCCTCTAGGGTCAAGTGGGGCACCCAATGTTGAAGCGGAAGAGGAGTCAGGTAGTGCGGAAGAAGCTTTCCTGTGGGAGCTATTTGGGACATTCAAATATTTTTCAAGGCCTGTATGGATAATATTGTCTGTTACTGCTCTTACATGGGTTGGGTGGTTTCCGTTTCTTCTATTTGATACTGATTGGATGGGCCGAGAAATTTATGGCGGTGAGCCAAATGAAGGCACTAAATATGATTCCGGAGTTAGAATGGGGGCACTTGGTTTATTGCTTAATTCAATTGTTCTTGGAATAACATCATTACTCATGGAGAAGCTATGCAGGAAGCGGGGACCTGGGTTTGTGTGGGGAATCGCAAATATCCTGATGGCTGCCTGCTTTGTAGCAATGCTTATAGTAACCTATGTGGCAAATAACATTGGTTATCTAGGGAAAGATCTACCACCCACTAGCATCGTGATATCTGCATTGACAATCTTTACCATTCTTGGGTTTCCACTGGCAATTACTTACAGTGTTCCATATGCCTTAATTTCCACGCATATTCAGTCATTGGGGCTCGGCCAAGGATTGTCAATGGGAGTTCTGAATCTTGCCATAGTGTTCCCACAGATGGTAGTGTCCGTAGGAAGTGGACCATGGGATCAGTTATTTGGTGGAGGAAACTCTCCAGCCTTTGCTGTGGCAGCAGTTGCAGCCCTTATCAGTGGATTCATAGCTGTCTTGGCTATTCCCCGAACCGGTGCTCAAAGTTCTAGAAGCCAAGTATGA 1533 0.4618 MANPEAHRHHNSQHHRSKSKPSSSAGRPKPRPKPRVSLIKLLRVASVAGGIQFGWALQLSLLTPYVQQLGIPHAWASIIWLCGPLSGLLVQPLVGHLSDRCTSRFGRRRPFILAGAVSIIISVLIIGHAADLGWKFGDTKKHRHAAVGFFVFGFWILDVANNVTQGPCRALLGDLTGKDHRRTRVANAYFSLFMAIGNILGYATGSYSGWYKVFPFTLTPACNISCANLKSAFFLDIGFIIITTYISIMAANEVPLGSSGAPNVEAEEESGSAEEAFLWELFGTFKYFSRPVWIILSVTALTWVGWFPFLLFDTDWMGREIYGGEPNEGTKYDSGVRMGALGLLLNSIVLGITSLLMEKLCRKRGPGFVWGIANILMAACFVAMLIVTYVANNIGYLGKDLPPTSIVISALTIFTILGFPLAITYSVPYALISTHIQSLGLGQGLSMGVLNLAIVFPQMVVSVGSGPWDQLFGGGNSPAFAVAAVAALISGFIAVLAIPRTGAQSSRSQV 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03150 510 PANTHER SUGAR TRANSPORTER 13 508 - -
Car05g03150 510 SUPERFAMILY MFS general substrate transporter 36 503 IPR036259 -
Car05g03150 510 CDD MFS_SLC45_SUC 41 496 - -
Car05g03150 510 TIGRFAM GPH_sucrose: sucrose/H+ symporter 37 501 IPR005989 GO:0005887|GO:0008515|GO:0015770
Car05g03150 510 MobiDBLite consensus disorder prediction 1 33 - -
Car05g03150 510 PANTHER SUCROSE/H+ SYMPORTER, PLANT, MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED 13 508 - -
Car05g03150 510 Pfam MFS/sugar transport protein 56 436 - -
Car05g03150 510 Gene3D MFS general substrate transporter like domains 40 497 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03150 Car-Chr5 76361728 76369750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03150 1 505 Sucrose Transporter Gene Family AT1G09960 69.291 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03150 K15378 - gmx:100787939 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03150 05 76361728 76369750 Car05g03150 05 76361728 76369750 ECH