Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03148 aTGACTCATCATCCATTCTTCCTCTTTAAACTCATACTAATTATCTCCATAACCACCATATCACATGTTACCACCACGAAAACAAACCAATCTGAGTTTTTTTCACTTATGAAACTGTCTCTCACAGGTAACCACCCTTTAGATTGGAGTTTCAAACTCGATAAACCGATATGCGCCTTCACAGGAATCACCTGTAACGACAAAGGAGACGTTATGAGTCTCGACTTTACAGGTTATTCGTCACTCTCAGGAAACTTTCCTCTAAATATTTGCATATACTTTCCAAACTTACGCATACTACGTTTAAGTAACACAAAATTCAAGTTCCCAACGAACAGTATAACAAACTGTTCGCACTTAGAAGAATTATACATGAACCAGATGCACCAGTCAGGAACACTTCCAAATTTCTCGTCATTAAAATCACTCAGAATTCTCGACTTATCATACAACTCCTTCACTGGTGAATTTCCAATGTCTGTTTTCAACCTCACAGAGCTTGAGATTCTTAACTTCAACGAAAACAATGGTTTCAATCTATGGGAGCTACCAAAGAGTTTTGAAAAGATGAAAAAATTGAAGTCAATGGTTTTGTCAACATGCATGGTGCATGGTCAAATTCCACCATCCATATCAAACATAACAACACTCATTGATCTTGAATTAAGTGGAAATTTCTTAACAGGTCAAATTCCAAAAGAGCTTGGTTTGTTGAAAAACTTGCAACAACTTGAACTTTACTATAACTATCATCTTCTTGGTAACATTCCAGAAGAGCTTGGAAATTTAACTGAGCTTGTTGATTTGGATATGTCAGTAAACAAATTAACAGGAACAATTCCATCTTCTGTATGTAACCTTCCAAACCTTCAAGTTCTTCAACTTTATAACAACAGTCTATCAGGTGAAATTCCACATTCGATCGAAAATTCGAAAAAACTTAGAATATTGTCGCTTTACGACAATTTCTTAAGTGGAAATGTTCCTAAGAAACTAGGACAGTTTTCAGGTATGGTTGTTCTTGATTTATCAGAAAACAAATTATCTGGTCCTTTGCCAGAACATGTTTGTAAAGGAGGTAAACTGTTATATTTTCTTGTTTTGGATAACATGTTTTCTGGTTTTATACCAGAAAGTTATGCAAACTGCATGTTTCTGTTAAGGTTTCGTGTCAGTAATAATCGTTTAGAAGGTTCTGTTCCAAAAGGGTTGTTAAGTTTACCACATGTTTCAATCATTGATTTGAGTAGCAACAATTTAACCGGTTCGATTCCCGAGTTAAACGGTAATTCAAGAAACTTGTCTGAACTTTTTCTTCAGAGGAACAAGATTTCAGGAAACATAACACCAACAATCTCTAGAGCTGTTAATCTTGTCAAAATTGATTTCAGTTATAACTTTCTTTATGGTCCTATACCTTCAGAAATTGGTAACCTTAGAAAGCTTAACTTGCTTATGTTACAAGGTAACAAGTTAAACTCTTCTATTCCTAGTTCACTTTCTTTGTTGGAATCACTTAACCTTCTTGATCTTTCAAATAATCTCTTAACTGGAAACATACCTGAAAGCCTTTCTGTGTTGTTGCCAAATTCTATTAACTTTTCTCATAATCTTCTTTATGGTCCTATTCCTCCTAAGTTGATTAAAGGTGGTTTAGTTGAAAGTTTTTCAGGTAATCCTGGTTTATGTGTTATGCCACTGTATGCTAATTCATCTGATCAAAAAAACTTTCCTTTATGTTCACATGCTGATCATAAATCTAAGATGAATACTATTTGGGTAGCTGGTGTATCTGTGGTTTTGATCTTTTTTGGAGCTGCTTTGTTTTTGAAAAAGAGGTGTAGCAATGAAGCGGCTTTGGTCGAACACGAAGACACGCTTTCGTCGTCTTTTTTCTCTTATGATGTTAAGAGTTTTCACATGATTAGTTTTGATCAAAGAGAGATTGTTGAGTCTTTGGTTGATAAGAATATAATGGGACATGGAGGGTCAGGGACAGTTTACAAGATCGAATTGAAGAGCGGCGATGTTGTCGCGGTTAAGAGACTTTGGAGTAGAAATTCAAAGGATTCATCATCAGCTGAAGATGATTTGTTTGTGGACAAGGCATTGAAAGCTGAAGTTGAGACACTTGGGAGTATAAGACACAAGAACATAGTGAAGTTGTATTGTTGTTTCTCAAGTTTGGATTGTAGTTTATTGGTTTATGAGTTTATGCCAAATGGTACTTTGTATGATTCTCTTCATAAGGGTTGGATTCATTTAGATTGGCCTACAAGGTATAGGATTGCACTTGGAATTGCTCAAGGTCTTGCATATCTTCACCATGATTTGGTTTTTCCTATTATTCATAGAGATATTAAGTCAACTAATATACTCTTGGATGAGGATTACCATCCAAAAGTTGCTGATTTTGGGATTGCTAAGGTTTTGCAAGCAAGAGGGGGAAAGGATTCTACAACCACTGTTATTGCAGGAACATATGGTTACTTAGCACCAGAATATGCATATTCATCAAGGGCAACCACAAAGTGTGATGTGTACAGTTTTGGTGTAATTCTGATGGAGTTATTAACAGGGAGAAAACCAATTGAGTCAGAATTTGGAGAGAACAGAAACATAGTGTTTTGGGTTTCAAACAAAGTAGAAGGCAAAGAAGGTGCTAGACCAAGTGAAGTTTTTGATCCAAAGTTATCATGTTCATTCAAAGATGACATGGTTAAATTGTTAAGGATTGCAATTCGATGTACCTACAAAGCACCAGCTAGTAGACCAACCATGAAAGAGGTTGTTCAACTTTTGATTGAGGCAGAGCCAAAAAGTTCTGATTCTTGCAAGTTGTTGCCAACCAAAGATGTGTCAACAAATGTTACCTTCATAAAGAAACCATTTGAGttataa 2901 0.3561 MTHHPFFLFKLILIISITTISHVTTTKTNQSEFFSLMKLSLTGNHPLDWSFKLDKPICAFTGITCNDKGDVMSLDFTGYSSLSGNFPLNICIYFPNLRILRLSNTKFKFPTNSITNCSHLEELYMNQMHQSGTLPNFSSLKSLRILDLSYNSFTGEFPMSVFNLTELEILNFNENNGFNLWELPKSFEKMKKLKSMVLSTCMVHGQIPPSISNITTLIDLELSGNFLTGQIPKELGLLKNLQQLELYYNYHLLGNIPEELGNLTELVDLDMSVNKLTGTIPSSVCNLPNLQVLQLYNNSLSGEIPHSIENSKKLRILSLYDNFLSGNVPKKLGQFSGMVVLDLSENKLSGPLPEHVCKGGKLLYFLVLDNMFSGFIPESYANCMFLLRFRVSNNRLEGSVPKGLLSLPHVSIIDLSSNNLTGSIPELNGNSRNLSELFLQRNKISGNITPTISRAVNLVKIDFSYNFLYGPIPSEIGNLRKLNLLMLQGNKLNSSIPSSLSLLESLNLLDLSNNLLTGNIPESLSVLLPNSINFSHNLLYGPIPPKLIKGGLVESFSGNPGLCVMPLYANSSDQKNFPLCSHADHKSKMNTIWVAGVSVVLIFFGAALFLKKRCSNEAALVEHEDTLSSSFFSYDVKSFHMISFDQREIVESLVDKNIMGHGGSGTVYKIELKSGDVVAVKRLWSRNSKDSSSAEDDLFVDKALKAEVETLGSIRHKNIVKLYCCFSSLDCSLLVYEFMPNGTLYDSLHKGWIHLDWPTRYRIALGIAQGLAYLHHDLVFPIIHRDIKSTNILLDEDYHPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSRATTKCDVYSFGVILMELLTGRKPIESEFGENRNIVFWVSNKVEGKEGARPSEVFDPKLSCSFKDDMVKLLRIAIRCTYKAPASRPTMKEVVQLLIEAEPKSSDSCKLLPTKDVSTNVTFIKKPFEL 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03148 966 SUPERFAMILY Protein kinase-like (PK-like) 637 934 IPR011009 -
Car05g03148 966 SUPERFAMILY RNI-like 69 350 - -
Car05g03148 966 Pfam Protein kinase domain 655 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g03148 966 Gene3D Ribonuclease Inhibitor 363 574 IPR032675 -
Car05g03148 966 Gene3D Phosphorylase Kinase; domain 1 636 738 - -
Car05g03148 966 Gene3D Ribonuclease Inhibitor 29 177 IPR032675 -
Car05g03148 966 PANTHER RECEPTOR PROTEIN-TYROSINE KINASE CEPR1 6 946 - -
Car05g03148 966 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 6 946 - -
Car05g03148 966 SUPERFAMILY RNI-like 251 572 - -
Car05g03148 966 ProSitePatterns Serine/Threonine protein kinases active-site signature. 782 794 IPR008271 GO:0004672|GO:0006468
Car05g03148 966 SMART serkin_6 653 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g03148 966 ProSiteProfiles Protein kinase domain profile. 653 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g03148 966 Gene3D Ribonuclease Inhibitor 254 362 IPR032675 -
Car05g03148 966 Gene3D Ribonuclease Inhibitor 178 253 IPR032675 -
Car05g03148 966 Gene3D Transferase(Phosphotransferase) domain 1 739 953 - -
Car05g03148 966 SMART LRR_typ_2 140 164 IPR003591 -
Car05g03148 966 SMART LRR_typ_2 503 527 IPR003591 -
Car05g03148 966 SMART LRR_typ_2 479 502 IPR003591 -
Car05g03148 966 SMART LRR_typ_2 335 359 IPR003591 -
Car05g03148 966 SMART LRR_typ_2 407 430 IPR003591 -
Car05g03148 966 SMART LRR_typ_2 287 311 IPR003591 -
Car05g03148 966 SMART LRR_typ_2 238 263 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03148 Car-Chr5 76321686 76325445 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03148 26 957 Receptor kinase-like Gene Family AT5G49660 63.501 0.0 1186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Car05g03148 Pkinase 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03148 - - lja:Lj1g3v2096140.1 1511.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03148 05 76321686 76325445 Car05g03148 05 76321686 76325445 ECH