Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03131 ATGGCCATCGCAACAGAGACTCAGCCTCAACAATACACGGCTTCTTCGCAGGTTTCAGGTTCAGCTGCAGAGCAAAAAAGGTGGACTCTAAATGATTTTGATATTGGAAAACCTCTTGGAAGGGGAAAATTCGGTCATGTCTATTTGGCCAGAGAAAAAACTAGTAATCATATCGTTGCTCTGAAAGTACTCTTTAAGAGCCAATTGCAACAATCCCAAGTTGAGCATCAGCTTCGGCGAGAAGTTGAAATACAGAGTCATCTCCGACATCCCCATATCTTGCGCCTTTATGGATACTTTTATGATCAGAAACGAGTTTACTTGATTTTAGAGTATGCACCCAAAGGTGAACTTTACAAGGAATTACAAAAATGCAAATATTTCAGTGAAAGACGTGCAGCTACTTATGTTGCATCATTGGCCCGAGCTCTTATATATTGCCATGGAAAGCATGTAATACACAGGGACATTAAACCAGAGAACCTTCTTGTTGGTGCACAGGGTGAACTGAAGATAGCAGACTTCGGGTGGTCAGTGCACACATTCAATCGTAGGCGGACCATGTGTGGCACACTGGATTACCTTCCACCTGAGATGGTGGAGAGTGTAGAACATGATGCAAATGTGGATATATGGAGCCTTGGTGTCCTTTGCTATGAGTTTCTTTATGGAGTCCCCCCTTTTGAGGCTAAAGAACATTCTGATACTTACAGGAGGATAATACAAGTGGATCTCAAATTCCCTCCTAAACCAATTGTTTCTTCTGCTGCAAAAGACCTCATCAGCCAGATGCTAGTCAAGGATTCCTCTCAACGACTACCATTGCACAAACTCCTAGAACACCCTTGGATTGTTCAGAATGCGGAACCCTCCGGTATATACAGGAGCTAG 891 0.4321 MAIATETQPQQYTASSQVSGSAAEQKRWTLNDFDIGKPLGRGKFGHVYLAREKTSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPHILRLYGYFYDQKRVYLILEYAPKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLVGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDANVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIIQVDLKFPPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIVQNAEPSGIYRS 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03131 296 CDD STKc_Aurora 32 285 - -
Car05g03131 296 PANTHER SERINE/THREONINE-PROTEIN KINASE AURORA-1 1 295 - -
Car05g03131 296 Gene3D Phosphorylase Kinase; domain 1 20 116 - -
Car05g03131 296 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Car05g03131 296 SUPERFAMILY Protein kinase-like (PK-like) 22 288 IPR011009 -
Car05g03131 296 ProSiteProfiles Protein kinase domain profile. 33 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g03131 296 SMART serkin_6 33 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g03131 296 Pfam Protein kinase domain 35 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g03131 296 PIRSF ILK 4 281 - -
Car05g03131 296 ProSitePatterns Protein kinases ATP-binding region signature. 39 62 IPR017441 GO:0005524
Car05g03131 296 Gene3D Transferase(Phosphotransferase) domain 1 117 293 - -
Car05g03131 296 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 1 295 IPR030616 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03131 Car-Chr5 76123387 76126186 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03131 24 290 CBL-interacting serine-threonine protein kinases AT5G10930 35.401 1.16e-54 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Car05g03131 Pkinase 3.6e-73 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03131 05 76123387 76126186 Car05g03131 05 76123387 76126186 ECH