Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03128 ATGTCCAAACTACCCCTCTTCATATTAAAAATCCCGTTTTACTTGTTCCTATTACTAACCTTCATTTTACCCTCCAAAGTAATTTCGCAAACCACAAATAGCGAAGAAACAATTCTTCTCACTCTTAAACGTCAACTGGGTAATCCGCCGTCGCTCCAATCATGGAAACCATCACCGTCTTCGCCGTGCAACTGGCCGGAGATCAGGTGCATCGGCAGCACCGTGACGGAGCTTCTCCTTCCGAGCGAAAACATCACAACACAGAAACTCCCGTCCACAATCTGCGACCTCAAGAACCTCACTAAGCTTGACCTCTCCAACAACTCCATCGCCGGCGAGTTCCCGACGTGGCTGTACAACTGCACCAACCTCCGGTACCTCGACCTCTCCCAAAACTACTTCGCCGGCGAAATCCCCAACGACATCGACCGTCTCAAAACACTGACGTACCTTAACCTCGGCGGCAACAGCTTCATCGGGGATATCCCGGCGGCGACCGGAAAACTCGCAAATCTTCAAACGCTTCACCTCTTTCAAAACAACTTCAACGGAACTTTTCCGAAGGAAATCGGAGACTTATCCAATCTCGAAACCTTAGGTTTAGCCTACAACTTCAAACTCAAACCCATGGCGATCCCGTCGGAGTTCGGAAAAATGAAGAGCTTGAAGTTCATGTGGATTTCACAGTGTAACTTGATCGAAAACATTCCAGAAAGTTTCGTGAATCTCACAAATCTCGAATACTTAGATTTATCGACGAACAATTTGACAGGAAACATACCGAGGAATTTGCTTTCGCTGAAGAACTTGAATTCTTTGTTCCTTTACCAGAATAGGTTGATTGGTGTAATACCTAATTCGGTTCAGGCATTGAATTTAACAAACATAGACTTGGCAACTAACAATTTAACTGGTTCAATACCCAAAGAATTTGGAAAGTTGCAGAATTTGACGTTTCTGCACTTGTATTCAAACCAGTTATCTGGTGAAATTCCTAGTAGTTTAGGGTTAATCCCAAATCTGAGAAACTTTAGGGTTTTTGACAATAAGTTGAATGGAACATTGCCTTCAGAATTGGGAAAGTATTCAAAGCTTGTGGCTTTTGAAGTTGCAGATAATAAACTCGTTGGTGGGTTACCAGAACATTTGTGTGATGGCGGTGCTTTGTTAGGTGTGATTGCTTTTTCTAATAATCTCAGTGGAAATTTACCAAAGTGGTTGTTTGAGAATTGTGCTTCTCTTACCACTATTCAGCTTTACAATAATAGATTTTCAGGGGAAGTTCCTTTGGGTTGGTGGAATTTGACTAAATTATCTACTTTGATGTTAAATGATAACTTTTTTTCTGGTCAACTTCCAACTAAATTATCATGGAACATGTCTAGACTTGAGATCAGAAACAACAATTTTTCAGGTCAAATATCTGTTGGAATTTCTTCTGCTTTGAATATGGTAGTTTTTGATGCAAGAAACAACACACTTTCGGGTGAATTTCCAAATGAATTAACGAGTTTATCTCAGATCACTACTCTAAGGCTTGATGGTAATCAACTCTCTGGAACACTTCCATCAGAGATAATATCGTGGCAATCGCTTAGTACTCTAACAATCTCAAGAAACAAAATTTCGGGTCAAATCCCGGTAGCTATGTCTTCTCTTCCTAATCTTATTGAGTTGGATTTGTCTGAAAATAACATAACTGGTGAAATCCCACCACAGCTTGTGCAATTGAGGTTTATTTTTCTCAACTTGTCCTCCAACAAGCTAACAGGGAACATTCCTGATGAGTTTGACAACCTTGCATATGAAAACAGTTTCTTGAACAATCCTCAACTATGTGCTCACAATGAAAAATTCAATCTTTCAAGCTGCTTGGCAAAAACCACACCACACTCCAGAAGCTATTCATCTTCGAAATCGAAACTCCTTGCTCTGAttcttgttgtcattgtcgttgtgttgttgGCCATCGCCTCTTTGGCCTTCTGCACATTGAAAAAGCATTGCGGCAAAAAGCATTGCAGCCGTAAGCTTTCAACATGGAGACTTACCTCATTCCAGAGGCTTGATCTCACCGAAATAAATATATTCTCAAGTTTGACAGACAATAACCTCATAGGAAGTGGAGGGTTTGGGAAAGTTTACCGAGTAGCTTCAACTTGTCCAGGTGAGTACGTCGCAGTGAAGAAGATTTGGAATGTCAAAGAGGTGGATGACAAATTGGAGAAAGAATTTATGGCTGAGCTTTTGTGTTGTTATTCAAGTGAGAACTCCAAACTTCTTGTTTATGAATACATGGAAAACCACAGCCTAGACAAATGGCTTCATAGAAAGAAGAAGAAAACATCAGTTTCAGGATTGAGTTTGCACGTGTTGAGTTGGCCAACgagattaaacattgccattggtgctgcacaaggcctttgttacatgcaccatgaatgttcaatgccaatcattcaccgagatgtcaagtccagcaatatactgcttgacTCGGAGTTCAGGGCGAGTATTGCAGATTTTGGGCTCGCCAAGATGTTGGCAAAGAATGGCAAACCATACACCATGTCTGTTATAGCAGGGTCTTTTGGATACATTCCACCAGAATATGCATATTCAACCAAGATTGATGAGAAAGTTGATGTGTACAGCTTTGGAGTTGTGCTTCTAGAGCTCGTGACGGGAAGAGAGCCTAACAATGGAGGCGACAATGCATGCAGCCTGGTTGATTGGGCATGGCAGCATTATAGTGAAGGCCTCATGTGCACAAGCACGTTACCCTCCACTAGGCCTTCCACAAAGGAGATTTTGCAAGTTCTTCGTCAGTGTTCTTCAGGTTCTACGTGTAACAGATTGGCAACTGAGTTCGATATTACTCCTCTTATTGGGAATACAACTTACATTTCCAGCTACAAAGATAGTAGAACTCTCCTCACTGTTCAAATGTAG 2952 0.396 MSKLPLFILKIPFYLFLLLTFILPSKVISQTTNSEETILLTLKRQLGNPPSLQSWKPSPSSPCNWPEIRCIGSTVTELLLPSENITTQKLPSTICDLKNLTKLDLSNNSIAGEFPTWLYNCTNLRYLDLSQNYFAGEIPNDIDRLKTLTYLNLGGNSFIGDIPAATGKLANLQTLHLFQNNFNGTFPKEIGDLSNLETLGLAYNFKLKPMAIPSEFGKMKSLKFMWISQCNLIENIPESFVNLTNLEYLDLSTNNLTGNIPRNLLSLKNLNSLFLYQNRLIGVIPNSVQALNLTNIDLATNNLTGSIPKEFGKLQNLTFLHLYSNQLSGEIPSSLGLIPNLRNFRVFDNKLNGTLPSELGKYSKLVAFEVADNKLVGGLPEHLCDGGALLGVIAFSNNLSGNLPKWLFENCASLTTIQLYNNRFSGEVPLGWWNLTKLSTLMLNDNFFSGQLPTKLSWNMSRLEIRNNNFSGQISVGISSALNMVVFDARNNTLSGEFPNELTSLSQITTLRLDGNQLSGTLPSEIISWQSLSTLTISRNKISGQIPVAMSSLPNLIELDLSENNITGEIPPQLVQLRFIFLNLSSNKLTGNIPDEFDNLAYENSFLNNPQLCAHNEKFNLSSCLAKTTPHSRSYSSSKSKLLALILVVIVVVLLAIASLAFCTLKKHCGKKHCSRKLSTWRLTSFQRLDLTEINIFSSLTDNNLIGSGGFGKVYRVASTCPGEYVAVKKIWNVKEVDDKLEKEFMAELLCCYSSENSKLLVYEYMENHSLDKWLHRKKKKTSVSGLSLHVLSWPTRLNIAIGAAQGLCYMHHECSMPIIHRDVKSSNILLDSEFRASIADFGLAKMLAKNGKPYTMSVIAGSFGYIPPEYAYSTKIDEKVDVYSFGVVLLELVTGREPNNGGDNACSLVDWAWQHYSEGLMCTSTLPSTRPSTKEILQVLRQCSSGSTCNRLATEFDITPLIGNTTYISSYKDSRTLLTVQM 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03128 983 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 16 920 - -
Car05g03128 983 SMART serkin_6 700 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g03128 983 Pfam Leucine rich repeat 99 157 IPR001611 GO:0005515
Car05g03128 983 Pfam Leucine rich repeat 531 589 IPR001611 GO:0005515
Car05g03128 983 SUPERFAMILY RNI-like 295 601 - -
Car05g03128 983 ProSitePatterns Serine/Threonine protein kinases active-site signature. 819 831 IPR008271 GO:0004672|GO:0006468
Car05g03128 983 Gene3D Ribonuclease Inhibitor 363 649 IPR032675 -
Car05g03128 983 Gene3D Ribonuclease Inhibitor 208 293 IPR032675 -
Car05g03128 983 Gene3D Ribonuclease Inhibitor 31 207 IPR032675 -
Car05g03128 983 SMART LRR_typ_2 97 121 IPR003591 -
Car05g03128 983 SMART LRR_typ_2 314 338 IPR003591 -
Car05g03128 983 SMART LRR_typ_2 435 459 IPR003591 -
Car05g03128 983 SMART LRR_typ_2 505 529 IPR003591 -
Car05g03128 983 SMART LRR_typ_2 243 267 IPR003591 -
Car05g03128 983 SMART LRR_typ_2 169 193 IPR003591 -
Car05g03128 983 SMART LRR_typ_2 553 577 IPR003591 -
Car05g03128 983 PRINTS Leucine-rich repeat signature 100 113 - -
Car05g03128 983 PRINTS Leucine-rich repeat signature 243 256 - -
Car05g03128 983 Pfam Protein kinase domain 702 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g03128 983 PANTHER KINASE FAMILY WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 16 920 - -
Car05g03128 983 ProSitePatterns Protein kinases ATP-binding region signature. 706 730 IPR017441 GO:0005524
Car05g03128 983 Gene3D Ribonuclease Inhibitor 294 362 IPR032675 -
Car05g03128 983 SUPERFAMILY Protein kinase-like (PK-like) 693 941 IPR011009 -
Car05g03128 983 Pfam Leucine rich repeat N-terminal domain 33 70 IPR013210 -
Car05g03128 983 PANTHER KINASE FAMILY WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 919 952 - -
Car05g03128 983 Pfam Leucine Rich Repeat 245 267 IPR001611 GO:0005515
Car05g03128 983 SUPERFAMILY L domain-like 37 379 - -
Car05g03128 983 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 919 952 - -
Car05g03128 983 ProSiteProfiles Protein kinase domain profile. 700 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g03128 983 Coils Coil 983 983 - -
Car05g03128 983 ProSiteProfiles Leucine-rich repeat profile. 245 268 IPR001611 GO:0005515
Car05g03128 983 Gene3D Transferase(Phosphotransferase) domain 1 685 959 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03128 Car-Chr5 76073746 76077736 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03128 23 963 Receptor kinase-like Gene Family AT5G25930 52.487 0.0 964
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Car05g03128 Pkinase 1.6e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03128 - K00924 adu:107461025 1312.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03128 05 76073746 76077736 Car05g03128 05 76073746 76077736 ECH