Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03115 ATGGCCAAAGAAACTCCAACTACTTCCAAGTTTCTCTCATTTATGTGCCTTTTCATGTTCATGCTCAACTTCCAATCATCTCATGGAGAACAGGAGTACAAGCTTCTCTTATCCTTCAAAGCATCCATCCACTTTGATCCTCTTCACTCTCTCTCCAACTGGGTCAACACTTCCTCTGACACTATCTGCAAATGGCACGGCGTAGTGTGCGACAATTGGTCGCATGTTAACTCCGTATCACTCTCAGGGAAAAACATCTCCGGAGAGATTTCCTCGTCAATCCTCCAACTTCCACATGTTACAAATCTCGACCTCTCCAACAATCAACTTGTTGGAGATATTGTCTTCAATTCTCAAGTCCTCTCTTCACTTCGTTACCTCAATCTCAGCAACAACAACCTCACTGGTTCTTTACCTCAATCCTTATTTTCTACATCGTTTATCAACCTCGAAACTCTCGATCTCGTAAACAACATGTTTTCAGGGAAAATACCCGACCAAATTGGATTACTTTCAAGCTTAAAATATCTTGATCTAGGTGGCAATGTTTTAGTTGGAAAAATTCCAAATTCCATCACTAACATGACATGTCTAGAATACTTGACTTTGGCTTCAAACCAATTAGTTGGTGAAATCCCAACGGAGATATTCCGAATGAAAAAGTTGAAATATATTTACTTGGGATACAACAATCTTTCAGGTGAGATACCAAAGAACATTGGAAAATTATTTTCTTTGAATCACCTTAATCTTGCTTACAACAATCTCACTGGAACAATTCCTGAATCACTGGGAAACCTCACATCTCTTCAATATCTCTTTCTCTACCAAAACAAACTCACTGGCCCAATTCCACAAACGATTTTCGAATTGAAAAACCTTATTTCACTTGATCTCAGTGATAATTCACTTTCTGGTGAGATTTCAAATCTTGTTGTCCACCTTCAAAAACTAGAAATTCTTCAACTTTTCTCAAACAACTTCACAGGAAAGATTCCAAACACAATAGCATCATTACCTCACCTTCAAGTTCTTCAGCTCTGGTCAAACAAATTAACAGGTGAGATTCCACAAGAACTTGGAAAAAACAACAACCTCACTATACTTGACCTCTCTTCCAACAACCTAACAGGCAAAATCCCAAACAGTTTATGTGCATCCAAAAATCTTTACAAACTTATCCTCTTTTCAAACTCTTTCAAAGGTGAAATACCAAAAGAGTTAACCTCATGCAGAACCTTACAACGAGTGAGACTTCAAAACAACAACTTGTCCGGGAAATTACCATTTGAAATGACTAAATTGCCCCTTATATACTTGTTGGATATCTCTGGTAACAAACTTTCTGGAAGAATTGATGACCGAAAATGGAACATGCCATCACTTCAAATGCTGAATTTGGCTAACAATAATTTCTCAGGTGAATTACCAAACTCTTTTGGGACTGAAAAACTGGAAGGATTGGATTTATCAGAGAATCAATTTTCTGGTAATATTCCAATAAGTTTTAGAAATTTACCTGAACTAGTTCAATTGAAACTCAACAATAACAAGTTTTTTGGTAACATACCAGAAGAACTTTTTAAATGCAACAAGCTTGTTGCTTTAGATTTAAGTAACAATCAGTTAAGCGGTAAAATTCCGGCGAAACTTGCCGAGATGCCAGTTCTCGGTCTACTCGACTTATCGGAGAATCAATTTTCCGGCGAAATTCCGAAGAGTTTAGGAAGCATTGAATCACTTGTTGAGGTTAATATATCGTTTAACCATTTTCATGGAAGTTTACCTTCCACTGAAGCTTTCTTTGCAATCAATGCAAGTTCAGTCGCCGGCAACAACCTTTGCGACCATAACGGTGATGATTCTAACGGTTTACCACCATGCAAAAGTGATCAATTCAATTCAACTACGTTGTTTGTTTTAATTTGTTTTCTGTTAGGGTTTGTTGCGTTGGTTGGTGCTGGTTTTCTTCTAGTTTTTATACGTAGAAGGAAGAAGGGTGTCGAGATTCGAAGATTTGAAAATGAAGACGGTTCATGGGAAGTGATGTTTTTCGATTCCAAGGGTTTGAAATTGATTAACGTGGAAGATGTTTTATCGTCGGTGAAAGAAGGAAAAGTGATTTCAAAGGGAAAAAATTGGGTTTCTTATGAAGGAAAGTGCGTTTCGAATGAAATGCAATTCGTTGTGAAAGAAATAAGCGATTTAAATTATCTTCCTTTGAGTTTCTGGGATGATGCGGTGGAGTTTGGGAAGAAAGTGAGACACGTTAATATTGTGAAGCTTATTGGAATGTTTAAGTGTGGGAAAAGAGGGTATTTGGTTTATGAGAATGAAGAGGGAAAGAAATTGAGTGAAATTGTTTATAATTTGAGCTGGGAAAGGCGAAAGAAAATTGCTGTGGGTGTTGCGAAAGCGATAAAGTTTTTGCAGTGTGAGTGTTTGTGGAATGGTTTGGTTGGTGAGGTTTCGCCGGAGATTGTTTTGGTGGATGGAAAGGGTGTCGCCCGCCTCATGCTCAACCCTCCCGGCATTGGAACGGATTTCAAGGGTTTTGTTTCTTCAGCCTACGTTGCTCCAGAGGAAAGAAAGGGGAAAGATGTGACGGAGAAGAGTGAGATATATGGTTTTGGAGTTATGGTGATTGAATTATTGACTGGGAGAAGCCCTCTGGACATAGAAGCAGGAAATGGCATACATCACAAGAATAATATTGTTGAGTGGGCCCGTTACTGTTACTCTGATTGTCATATTGACACGTGGATAGATCATGTCATAATGAAGGGTGGAGATGCATCCACCTATGAAAACGACATCGTGGAAACCATGAATCTTGCTCTGCATTGTACCGCAACTGATCCCACTGCAAGGCCATGCGCAAGAGATGTACTCAAAGCCCTAGAGACCAACACATTCACTTTTTGCTGA 2928 0.3883 MAKETPTTSKFLSFMCLFMFMLNFQSSHGEQEYKLLLSFKASIHFDPLHSLSNWVNTSSDTICKWHGVVCDNWSHVNSVSLSGKNISGEISSSILQLPHVTNLDLSNNQLVGDIVFNSQVLSSLRYLNLSNNNLTGSLPQSLFSTSFINLETLDLVNNMFSGKIPDQIGLLSSLKYLDLGGNVLVGKIPNSITNMTCLEYLTLASNQLVGEIPTEIFRMKKLKYIYLGYNNLSGEIPKNIGKLFSLNHLNLAYNNLTGTIPESLGNLTSLQYLFLYQNKLTGPIPQTIFELKNLISLDLSDNSLSGEISNLVVHLQKLEILQLFSNNFTGKIPNTIASLPHLQVLQLWSNKLTGEIPQELGKNNNLTILDLSSNNLTGKIPNSLCASKNLYKLILFSNSFKGEIPKELTSCRTLQRVRLQNNNLSGKLPFEMTKLPLIYLLDISGNKLSGRIDDRKWNMPSLQMLNLANNNFSGELPNSFGTEKLEGLDLSENQFSGNIPISFRNLPELVQLKLNNNKFFGNIPEELFKCNKLVALDLSNNQLSGKIPAKLAEMPVLGLLDLSENQFSGEIPKSLGSIESLVEVNISFNHFHGSLPSTEAFFAINASSVAGNNLCDHNGDDSNGLPPCKSDQFNSTTLFVLICFLLGFVALVGAGFLLVFIRRRKKGVEIRRFENEDGSWEVMFFDSKGLKLINVEDVLSSVKEGKVISKGKNWVSYEGKCVSNEMQFVVKEISDLNYLPLSFWDDAVEFGKKVRHVNIVKLIGMFKCGKRGYLVYENEEGKKLSEIVYNLSWERRKKIAVGVAKAIKFLQCECLWNGLVGEVSPEIVLVDGKGVARLMLNPPGIGTDFKGFVSSAYVAPEERKGKDVTEKSEIYGFGVMVIELLTGRSPLDIEAGNGIHHKNNIVEWARYCYSDCHIDTWIDHVIMKGGDASTYENDIVETMNLALHCTATDPTARPCARDVLKALETNTFTFC 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03115 975 Pfam Leucine rich repeat 460 519 IPR001611 GO:0005515
Car05g03115 975 Pfam Leucine rich repeat 149 208 IPR001611 GO:0005515
Car05g03115 975 Pfam Leucine rich repeat 340 399 IPR001611 GO:0005515
Car05g03115 975 Pfam Leucine rich repeat 221 280 IPR001611 GO:0005515
Car05g03115 975 SMART serkin_6 702 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g03115 975 Pfam Leucine rich repeat N-terminal domain 31 71 IPR013210 -
Car05g03115 975 Pfam Leucine Rich Repeat 293 314 IPR001611 GO:0005515
Car05g03115 975 Pfam Leucine Rich Repeat 123 142 IPR001611 GO:0005515
Car05g03115 975 ProSiteProfiles Leucine-rich repeat profile. 293 315 IPR001611 GO:0005515
Car05g03115 975 Gene3D Phosphorylase Kinase; domain 1 675 778 - -
Car05g03115 975 SMART LRR_typ_2 506 530 IPR003591 -
Car05g03115 975 SMART LRR_typ_2 267 291 IPR003591 -
Car05g03115 975 SMART LRR_typ_2 243 266 IPR003591 -
Car05g03115 975 SMART LRR_typ_2 459 482 IPR003591 -
Car05g03115 975 SMART LRR_typ_2 171 194 IPR003591 -
Car05g03115 975 SMART LRR_typ_2 339 363 IPR003591 -
Car05g03115 975 SMART LRR_typ_2 97 118 IPR003591 -
Car05g03115 975 SMART LRR_typ_2 195 219 IPR003591 -
Car05g03115 975 SMART LRR_typ_2 121 145 IPR003591 -
Car05g03115 975 SMART LRR_typ_2 365 387 IPR003591 -
Car05g03115 975 PANTHER - 11 970 - -
Car05g03115 975 Gene3D Ribonuclease Inhibitor 285 382 IPR032675 -
Car05g03115 975 Gene3D Ribonuclease Inhibitor 188 284 IPR032675 -
Car05g03115 975 ProSiteProfiles Leucine-rich repeat profile. 365 387 IPR001611 GO:0005515
Car05g03115 975 SUPERFAMILY L domain-like 38 380 - -
Car05g03115 975 ProSiteProfiles Leucine-rich repeat profile. 123 145 IPR001611 GO:0005515
Car05g03115 975 ProSiteProfiles Protein kinase domain profile. 646 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g03115 975 Gene3D Ribonuclease Inhibitor 29 187 IPR032675 -
Car05g03115 975 Gene3D Ribonuclease Inhibitor 483 621 IPR032675 -
Car05g03115 975 Gene3D Ribonuclease Inhibitor 383 482 IPR032675 -
Car05g03115 975 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 11 970 - -
Car05g03115 975 SUPERFAMILY L domain-like 314 619 - -
Car05g03115 975 Pfam Leucine Rich repeat 529 546 IPR001611 GO:0005515
Car05g03115 975 PRINTS Leucine-rich repeat signature 124 137 - -
Car05g03115 975 PRINTS Leucine-rich repeat signature 291 304 - -
Car05g03115 975 SUPERFAMILY Protein kinase-like (PK-like) 682 971 IPR011009 -
Car05g03115 975 Pfam Protein kinase domain 706 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g03115 975 Gene3D Transferase(Phosphotransferase) domain 1 779 973 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03115 Car-Chr5 75947770 75952096 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03115 17 968 Receptor kinase-like Gene Family AT2G25790 51.037 0.0 881
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Car05g03115 Pkinase 5.7e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03115 - - gmx:100776180 1366.29