Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03114 ATGATGGCGGTGAGTTCAGGGTGTAAAGATGGGAGTAAGGTGGTGATGGACAACGGAAAGTATGTAAGATATACACCGGAGCAGGTGGAAGCACTTGAGAGAGTTTACCATGAATGTCCTAAACCTACTTCCCTTCGACGCCAGCAACTTATTAGAGACTGTCCTATTCTCTCCAATATTGAACCCAAACAGATCAAGGTTTGGTTCCAGAACAGAAGGTGCAGAGAGAAACAGAGGAAAGAAGCGTCTCGGCTACAAGCAGTGAACAGGAAGCTAACAGCAATGAACAAATTGCTTATGGAGGAAAATGAGAGATTGCAGAAACAGGTGTCACAGCTTGTGTATCAGAATACCTTTTTCCGCCAACATACACAAaatGGGACGGTTGCCACGACGGACACGAGTTGTGAGTCGGTGGTAACGAGCGGTCAGCAGCATCCACCAAGAGATGCAAGCCCTGCTGGACTTTTGTCCATTGCAGAGGAAACTTTAGCAGAGTTTTTATCAAAGGCCACTGGGACTGCTGTTGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCAATTTCTCACGGTTGCCCTGGAGTCGCTGCACGTGCCTGCGCCCTTGTTAGTCTAGAACCTGCCAGGGTTGCAGAAATCCTCAAAGATAGGCTCTCATGGTACCGTGATTGCCGAACTCTCGATGTTCTGAATGTTATGTCCACAGGAAATGGAGGAGGAACCATTGAATTGCTTTACATGCAGTTGTATGCTCCAACAACTTTGGCACCAGGTCGTGATTTCTGGTTGCTGCGCTACACTTCACTTTTGGAGGATGGTAGTCTTGTGGTGTGTGAAAGATCACTTAACAACACTCAGAATGGACCAACTATGCCTCCGGTGCAGCATTTTGTCAGAGCTGATGTGCTTCCAAGTGGGTATCTCATTAGGCCTTGTGAAGGAGGGGGATCAATTATTCATATTGTTGATCATATGGTTTTAGAGCCATGGAGTGTACCTGAAGTTTTGCGTCCACTTTATGAGTCATCCATGCTGCTTGCTCAGAGGACAACTATGGCAGCTTTACGTCATTTGAGGCAAATTTCTCAAGAAGTTTCTCAGCCAAGTGTGACAGGATGGGGAAGAAGGCCTACAGCTCTTCGCGCACTTAGTCAGAGATTGAGCAAGGGCTTCAATGAAGCTGTGAACGGATTTACAGATGATGGATGGTCCATGTTAGAGAGTGATGGTATTGATGATATCACCCTTCTTGTGAATTCATCGCCTAGCAAGATGATGGGAGTTAATCTTGGTTATAATAACGGATTTCCATCTATGACCAGTTCTGTTCTATGTGCCAAAGCTTCCATGTTGTTACAGAATGTTCCTCCAGCTATTCTTCTAAGATTCTTGAGGGAACACAGATCAGAATGGGCAGATACAAGTATTGATGCTTACTCAGCTGCTGCCATTAAAGCCGGTCCCTGTACCTTGCCAGGGGCCAGGGCAGGAGGTTTTGGAGGTCAGGTTATTCTTCCACTAGCTCAAACAATTGAGCATGAAGAGTTCATGGAAGTTATTAAGCTTGAAAACATGGGCTACTATAGGGATGATATGACAATGCCTGGTGATATTTTCCTCTTGCAACTTTGTAGTGGAGTCGATGAGCATGCAGTTGGCACCAGTGCAGAGCTTATTTTTGCTCCAATAGATGCATCTTTCTCTGATGATGCACCTATTTTGTCTTCTGGTTTTCGCATCATACCTCTCGATTCTTGCACGGATGCTGCTAGTCCGAACCGTACACTTGATCTTGCTTCTGCACTTGAGGTTGGATCCGCAGGAAACAAAGCAGGTGGTGGTGCCAATTCAGGTCATTCTGGCAACACAAAATCTGTGATGACAATTGCATTCCAGTTTGCATTTGAAGTCCACCTTCAAGATAGTATAGCAACTATGGCGCGACAGTACGTGCGCAGCATCGTTGCGTCTGTTCAGAGGGTTTCATTAGCACTTTCTCCTTCGCATTTTGGTTCTCAGAATGCTTTTCAGTTACCACATGGCATTCCGCATTTTGGTTCTCAGAATGCTTTTCAGTTACCACATGTCATTCCTGAGGCACAAACACTCGCTCGGTGGATCTGTAACAGCTATAGATTCTATTTAGGCGTAGAACTACTAAAATGTGAAGGCAGTGAATCCATTCTCAAATCCCTTTGGCATCACTCAGATGCAGTTCTATGCTGCTCTTTAAAGGCATTACCTGTTTTTACATTTGCAAATCAAGCTGGACTTGACATGCTCGAAACCACATTGGTTGCACTTCAAGACATTACTCTGGAAAAGATATTTGATGACAATGGAAAGAAAAGCCTGTGCTCTGAATTCCCCCAGATAATGCAGCAGGGATTCATGTGTATGCAAGGTGGTATATGTTTGTCCAGCATGGGGAGGGCAATAACCTATGAGAGAGCAGTAGCATGGAAAGTATTAAACGAAGAAGAATCAGCTCATTGCATATGTTTTATGTTTATCAATTGGTCTTTTGTTTGA 2556 0.4487 MMAVSSGCKDGSKVVMDNGKYVRYTPEQVEALERVYHECPKPTSLRRQQLIRDCPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENERLQKQVSQLVYQNTFFRQHTQNGTVATTDTSCESVVTSGQQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCPGVAARACALVSLEPARVAEILKDRLSWYRDCRTLDVLNVMSTGNGGGTIELLYMQLYAPTTLAPGRDFWLLRYTSLLEDGSLVVCERSLNNTQNGPTMPPVQHFVRADVLPSGYLIRPCEGGGSIIHIVDHMVLEPWSVPEVLRPLYESSMLLAQRTTMAALRHLRQISQEVSQPSVTGWGRRPTALRALSQRLSKGFNEAVNGFTDDGWSMLESDGIDDITLLVNSSPSKMMGVNLGYNNGFPSMTSSVLCAKASMLLQNVPPAILLRFLREHRSEWADTSIDAYSAAAIKAGPCTLPGARAGGFGGQVILPLAQTIEHEEFMEVIKLENMGYYRDDMTMPGDIFLLQLCSGVDEHAVGTSAELIFAPIDASFSDDAPILSSGFRIIPLDSCTDAASPNRTLDLASALEVGSAGNKAGGGANSGHSGNTKSVMTIAFQFAFEVHLQDSIATMARQYVRSIVASVQRVSLALSPSHFGSQNAFQLPHGIPHFGSQNAFQLPHVIPEAQTLARWICNSYRFYLGVELLKCEGSESILKSLWHHSDAVLCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDNGKKSLCSEFPQIMQQGFMCMQGGICLSSMGRAITYERAVAWKVLNEEESAHCICFMFINWSFV 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03114 851 PANTHER CLASS III HD-ZIP PROTEIN CNA1 5 851 - -
Car05g03114 851 Coils Coil 75 116 - -
Car05g03114 851 Pfam MEKHLA domain 710 850 IPR013978 -
Car05g03114 851 ProSiteProfiles START domain profile. 149 378 IPR002913 GO:0008289
Car05g03114 851 Gene3D - 12 86 - -
Car05g03114 851 SMART HOX_1 17 83 IPR001356 GO:0003677
Car05g03114 851 Pfam START domain 159 368 IPR002913 GO:0008289
Car05g03114 851 SMART START_1 158 369 IPR002913 GO:0008289
Car05g03114 851 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 5 851 IPR044830 GO:0003700
Car05g03114 851 SUPERFAMILY Homeodomain-like 19 83 IPR009057 -
Car05g03114 851 CDD homeodomain 20 80 IPR001356 GO:0003677
Car05g03114 851 Gene3D - 192 375 IPR023393 -
Car05g03114 851 ProSiteProfiles 'Homeobox' domain profile. 15 79 IPR001356 GO:0003677
Car05g03114 851 Pfam Homeodomain 20 78 IPR001356 GO:0003677
Car05g03114 851 CDD bZIP 72 111 - -
Car05g03114 851 SUPERFAMILY Bet v1-like 158 370 - -
Car05g03114 851 CDD START_ArGLABRA2_like 153 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03114 Car-Chr5 75935235 75940528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03114 16 851 Homeobox Transcription Factor Family AT4G32880 77.988 0.0 1357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Car05g03114 START 1.2e-51 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03114 K09338 - gmx:100815727 1526.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03114 05 75935235 75940528 Car05g03114 05 75935235 75940528 ECH