Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03096 ATGAAGTCATCCTTAACGTTACCATCATATTCATTACGAACTTGTTGTTGCATCACCACTCAATCATCATCTTCACGAAGACTTTCTCTCTTTCACCTTCTCACTACCACCGGTGCTATTGCTGTTGCTCTTCCACAATCTCAATCACTATTCGCTGCTGCAAAAGGATCAGATTTGTTTAAAATCTCACAGGCTATTGCCGCAGTAGATCCATCTCAACCAAACCAAAACTTGTTTCATTGGATCCAAAATGATAATCGAAGATTTCTACATGTTGTATATAGTGTTGGAGACTTGGACAAAACTATTAAATTCTACACTGAATGCCTTGGCATGAAACTTTTGAGAAAGCGCGATTTACCGGAAGATAAATATTCAAATGCTTTTCTTGGATATGGTCCTGAAGATTCCCATTTTACAGTTGAACTTACTTATAATTATGGCGTGGATAACTATGACGTGGGAACTGGTTTTGGTCATTTTGGTATTGTAACTCAAGATGTTGCCAAGACAATTGATCTTGTAAAGGCGAAAGAGGGAAAGGTTACCAGGGAGCCGCAGCCTGTCAAAAGTGGCTCTATGGTAACTGCTTCTATTGAAGATCCTAATGGCTATAGGTTTGAGCTTTTGGAGAGAAGACCTACGCGTGAACCGTTAAACCAAGTGATGCTTCGAGTAGGTGATCTTGATCGTGCCATAGACTTCTATCAAAAAGCTGTGGGCATGAAACTTCTCTATAAGATAGACAACCCTGAAGAAAAGTACACAGTAGCCATTTTGGGCTATGATTCTGAAGCTAATAGCCCTGTTCTAAAACTGACATATAACTACGGCGTCACTAATTATGACAAAGGAAATGGTTATACACAGATTGCAATAGGCACAAATGATGTCTATAAGACTGCAGAAGCAATCAAATTATGTGGAGGAACGATTATCCGCGAACCTGGACCCTTACCAGGTATCAACACCAAGATTGTAGTTTGCTTGGATCCTGATGGTTGGAAACTGGTATTTGTTGATAATGTTGATTTTCTGAAGGAGTTAGAGTGA 1053 0.396 MKSSLTLPSYSLRTCCCITTQSSSSRRLSLFHLLTTTGAIAVALPQSQSLFAAAKGSDLFKISQAIAAVDPSQPNQNLFHWIQNDNRRFLHVVYSVGDLDKTIKFYTECLGMKLLRKRDLPEDKYSNAFLGYGPEDSHFTVELTYNYGVDNYDVGTGFGHFGIVTQDVAKTIDLVKAKEGKVTREPQPVKSGSMVTASIEDPNGYRFELLERRPTREPLNQVMLRVGDLDRAIDFYQKAVGMKLLYKIDNPEEKYTVAILGYDSEANSPVLKLTYNYGVTNYDKGNGYTQIAIGTNDVYKTAEAIKLCGGTIIREPGPLPGINTKIVVCLDPDGWKLVFVDNVDFLKELE 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03096 350 PANTHER LACTOYLGLUTATHIONE LYASE CHLOROPLASTIC-RELATED 22 350 - -
Car05g03096 350 Gene3D - 62 213 IPR029068 -
Car05g03096 350 Gene3D - 215 350 IPR029068 -
Car05g03096 350 TIGRFAM glyox_I: lactoylglutathione lyase 77 220 IPR004361 GO:0004462|GO:0046872
Car05g03096 350 TIGRFAM glyox_I: lactoylglutathione lyase 219 343 IPR004361 GO:0004462|GO:0046872
Car05g03096 350 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 219 338 IPR004360 -
Car05g03096 350 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 89 209 IPR004360 -
Car05g03096 350 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 88 212 IPR037523 -
Car05g03096 350 PANTHER LACTOYLGLUTATHIONE LYASE 22 350 - -
Car05g03096 350 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 218 342 IPR037523 -
Car05g03096 350 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 87 214 IPR029068 -
Car05g03096 350 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 219 342 IPR029068 -
Car05g03096 350 ProSitePatterns Glyoxalase I signature 1. 91 112 IPR018146 GO:0004462|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03096 Car-Chr5 75740854 75744663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03096 219 341 Calmodulin-binding Proteins AT1G08110 26.351 2.11e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03096 K01759 - mtr:MTR_3g110185 558.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03096 05 75740854 75744663 Car05g03096 05 75740854 75744663 ECH