Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03095 ATGGAGAGAGTCGTCGGTGGAAAGTTTAAGATTGGTCGCAAAATCGGAAGTGGCTCATTCGGTGAAATTTATATCGCGTCAAATATGGATAACTCTGAGATCGTTGCCGTTAAGATGGAAAACAGGAAAACAAGACATCCACAACTATTGTATGAGGCTAAATTATACAGTATTCTTCAAGGAGATAGTGGTATTCCAAGTATGAAATGGTGCGGTACTGATGGAGACGATAATATTCTGGTTATGGATCTTCTAGGACGTAGTCTGGAGGACCTTTTTGTCTTTTGTGGGATGAAGTTTTCTTTAAGAACAGTTTTGATGCTGGCCGACCAGATGCTTTCGAGAATAGAGTATTTACATTCCAAGGGATTTTTGCATAGAGACATCAAACCGGATAACTTCCTAATGGGTCTTAGGAAAAAAGCAAGTCAGGTTTATATTATTGATTTTGGACTAGGAAAAAGATATCGGGACCCCAAAACAAACACACATATTCCTTACAGAGAGAATAAAAATTTAACAGGGACTGCACGTTATGCAAGTTGCAATACTCACTTAGGAATTGAGCAAAGTCGTCGTGATGATTTGGAGTCTATTGGCTATGTTCTTATGTACTTCTTAAGAGGAAGCCTTCCTTGGCAGGGTCTGAAAGCTGTCGACAAAAAGGAAAAGTATGATAAGATTCGTGAGAAGAAGTTATCAACTCCCTTTGAGACGCTTTGCAAGTCATATCCCGTGGAGTTCGCTGCTTACTTTCACTATTGTCGCTCTTTGACATTTGATCAAGATCCAGATTATGGATTCTTAAAGCGTCTGTTTCGTGATTTGTTCACTCGTGAAGGATATGAGTATGACCATTTATTTGACTGGACCATCCTAAAACATCAGCAAACGCAACAGACAAGGAGACAAAATCAATCATCACCTTCAGATGCTGTGCCTAGCAGTCTAGAACCAGTGGTTATGGAAAAGCATTCAGGAGTAAATAATTCACCTCAAATTACTGTAACAAAACTGCTAAGCAATCTGGATCGCCGTATGCAGCCTAAGCCATCCAATGTTAAGAACATGAATGCCAAGAATCATACCGAAAAACATACTGTAAACAATGGCCCATCCACTTCATCTGCCATGCCCAAATCAACTGCAGAAAATCTGGATTCCTTCATTACGTCGAATTTCTTCAGCCAAATAGTGACAGTATTTTGGAGGAGTCACTTAGAGCTTCTTTTTAATTTTACTATTGCTAATGTCATGCCGCTCAATTCACCAGAGGAACACTTTAGGGACTTGGAATATTCATTCATCTTTACAATGAGCTCCAACACCTCTGTCTCTAAATGCTCGGTTCATCAAATAGAGAACATTGATGAGAATGTTCCTGCAGATGGGCCTGCATCATCTTGCCCCCCGCCTGATACGCCCACAGAATCAATGGAGTTCCTTGCTAGATCATGGAGTCTTTCTGCCATGGAACTCTCCAAAGCACTGCATAACACCAATAGTACGACCTCCACCGGTATTGAGATGCAACTTTTATGCCCTTCTGACCAGTTCTATACAAAGGGTTTCACTGCCTCTAAGGATTCTTATGTGCAAATCAATAACATAGTAATCCGCCATCTGCAGGATTTGTTTTTACTTCATCAAGCCCTTTCTCCGGAATCCCTTTCCAGTCAAAACTTGCTGAGAAATGGGCTTCACAGGAGCTTGATAAAAGGGAGGACAACAGGAAGGTGGTTGAAAGATCAGAAGGAGAGAAAAAAACAGGAAATTAGGACTCATAACGCTCAGTTGCACGCTGCAGTATCTGTGGTTGGTGTTGCTTCTGCTGTTGTAGCAATTGCAGCATCAATAGCATCATCTGAAAAGCCTAATGACAACCAAAAGAACCTTACCATGGCTTCTGCTGCAATTTCATCTGCAGCAGCTTTAGTAGCCTCCCACTGCATTGAGATTGCAGAAAATATGGGAGCTGAACAGGACCAAATCATAACAGCAGTTAACTCTGCTATTAATGCAAAAACCAATGGAGATATTATGACTCTAACAGCTGGAGCAGCCACAGCCTTGCGAGGAGCTGCTACTCTAAAAGCGCGTCTGCAGAAGGGGCTTGGAGCTACTACAATTCCTCCAATTGAGGAGAAATGCGGTGAAGCCAAAGAAGCAGGCATCTTGACAGCACTGGACTGTTTCTTTAGAGGAGGAGAACTTCTCAAACGTACAAGAAAAGGAGTTCTTCATTGGAAGCAAGTCTCTTTCAATATAAATTCAAATTTGCAGGTCGTAGCCAACATGAAAAGCAAGCATATGGCAGGAACACTCACCAAAAAGAAGAAATATATAGTCACTGGAGTGTACAGCGATATCCCAGCTTGGCCCGCAAGAGAGAAGGAAGACATTGGTGAAAAGAGAGCATATTTTGGAATAAAAACAGCAGACAGGATAATAGAATTTGAATGTGAAAGTAAAGAAGACAAACAGTTATGGCTTGAGGGAATCCAGTACATGTTGAATTGCCGTGCCAAAGTAACATATTAA 2541 0.4128 MERVVGGKFKIGRKIGSGSFGEIYIASNMDNSEIVAVKMENRKTRHPQLLYEAKLYSILQGDSGIPSMKWCGTDGDDNILVMDLLGRSLEDLFVFCGMKFSLRTVLMLADQMLSRIEYLHSKGFLHRDIKPDNFLMGLRKKASQVYIIDFGLGKRYRDPKTNTHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESIGYVLMYFLRGSLPWQGLKAVDKKEKYDKIREKKLSTPFETLCKSYPVEFAAYFHYCRSLTFDQDPDYGFLKRLFRDLFTREGYEYDHLFDWTILKHQQTQQTRRQNQSSPSDAVPSSLEPVVMEKHSGVNNSPQITVTKLLSNLDRRMQPKPSNVKNMNAKNHTEKHTVNNGPSTSSAMPKSTAENLDSFITSNFFSQIVTVFWRSHLELLFNFTIANVMPLNSPEEHFRDLEYSFIFTMSSNTSVSKCSVHQIENIDENVPADGPASSCPPPDTPTESMEFLARSWSLSAMELSKALHNTNSTTSTGIEMQLLCPSDQFYTKGFTASKDSYVQINNIVIRHLQDLFLLHQALSPESLSSQNLLRNGLHRSLIKGRTTGRWLKDQKERKKQEIRTHNAQLHAAVSVVGVASAVVAIAASIASSEKPNDNQKNLTMASAAISSAAALVASHCIEIAENMGAEQDQIITAVNSAINAKTNGDIMTLTAGAATALRGAATLKARLQKGLGATTIPPIEEKCGEAKEAGILTALDCFFRGGELLKRTRKGVLHWKQVSFNINSNLQVVANMKSKHMAGTLTKKKKYIVTGVYSDIPAWPAREKEDIGEKRAYFGIKTADRIIEFECESKEDKQLWLEGIQYMLNCRAKVTY 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03095 846 SUPERFAMILY PH domain-like 723 837 - -
Car05g03095 846 ProSiteProfiles PH domain profile. 731 839 IPR001849 -
Car05g03095 846 Pfam Auxin canalisation 472 715 IPR008546 -
Car05g03095 846 PANTHER CASEIN KINASE-RELATED 1 391 - -
Car05g03095 846 Gene3D Transferase(Phosphotransferase) domain 1 1 336 - -
Car05g03095 846 MobiDBLite consensus disorder prediction 347 380 - -
Car05g03095 846 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Car05g03095 846 SMART PH_update 732 841 IPR001849 -
Car05g03095 846 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g03095 846 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 391 - -
Car05g03095 846 Gene3D - 713 845 IPR011993 -
Car05g03095 846 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Car05g03095 846 SMART serkin_6 9 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g03095 846 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Car05g03095 846 Pfam Plant pleckstrin homology-like region 737 841 IPR013666 -
Car05g03095 846 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03095 Car-Chr5 75732262 75741964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03095 9 215 EF-hand Containing Proteins AT4G23650 28.638 1.08e-13 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Car05g03095 Auxin_canalis 2.5e-74 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03095 K08960 - gmx:100792736 652.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03095 05 75732262 75741964 Car05g03095 05 75732262 75741964 ECH