Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03081 ATGGGAAGTGAGAGGAAAATTACTGCTCCATCAGATACTGCAGAGGATAGTGTACAGAAAATTAGAGCACTACATGGgaggactactggccctacaaggcgttccaccaaaggacaatggaccgccgaggagGATGATATTTTGAGGAAGGCTGTTGAGCAATTTAAAGGAAAGAACTGGAAAAAAATAGCGGAGTGTTTCAAGGATAGAACTGATGTACAGTGCCTGCATAGGTGGCAAAAAGTCTTAAATCCAGAACTTATCAAAGGTCCTTGGTCTAAAGAGGAAGATGAAACAATTATTGATTTGGTAAACGAATATGGGCCTAAAAAGTGGTCTACTATCGCACAGCATTTACCAGGACGTATTGGTAAGCAATGTCGAGAAAGGTGGCATAATCATCTTAATCCTTCTATAAACAAGGAAGCATGGACGCAGGAAGAAGAGTTGGCTCTAATACATGCTCATCAAATTTATGGGAACAGATGGGCAGAATTAACGAAGTTTTTGCCTGGAAGGACAGACAATGCTATAAAGAACCACTGGAATAGTTCTGTCAAAAAAAAATTGGATTCTTACTTGGCATCAGGCTTGCTTACTCAGTTACAAAATGTTCCACTTGTTGGAAATCCAAATCAACCAATTGCTTCATCCTCTGCAAGGTTGCAGTGTAGTGATGATAATGGTCCTAGGGAGACTGAAGGTGAGGAAATTTCACCGTGTAGCCAAGAATCAGTTAATGCCGGTTACTTTTCTTCTGGAGGAGAGTTGAACATTGTTGCTATACAAAATGGGGAGGAGTACAGACCAAATGAAGAATCTAATCAACCATCCTGCTCTGAGCCATATTACATGTCTCTAGAAGACGTTACTCGCCAAGAGGTTTACTCTTCTCAATTTATTGAACAGAAATATTCAAATGAACACGGAAGTTCCTCTACAAACGCAGATTGCGAATTTAATTTACATGCTTTGCCCAACATATCCTCGCTGGACTTTGGGCAGGAATCATCGCAGTTGCATAATGGTTCAATAGCTCCTAGTGAAAGTCATGACATGATGATTGTTCCATATGGATATCAGTCTTCATCTTTGGATAATGTTAAAGGAGAGCAAAACATGTTGATAACTGATGATGAATGTTGTAGATTCCTATTTTCAGAGGCAATGAGTGATGAATGCTTTTCCTCTGGAGGAGTAAATAATGTTGACTTATCTGGATGCACTTCATCTCTTTGTCAGTCATCTTTACCATCTGGTGGTAGGATGATGATGTATACTGCCGAAGCCAATCAGTTGGTAGCCTCTGAGGATCAACAGTTTGTCTCCAGAGAACATGATGGCTTGATTTATGCCAACGATAACAATAGGATAGAAGACGTCGTGGAAGATGATAATTTAAAATTGGTCCCTGTAAATAGTTTTGACTGTGGATCAGATACTAATCAAACTTGCTATCCAGTTGATGAAAAACCAGATGTGCATGCAAAACAGGAGGAAACAGGAGGAACTCTCTGTTATGAACCACCTCGTTTTCCAAGCTTGGATATACCTTTCTTGAGCTGTATCCGTCAGTTTCTGATGTCTCCTATGAACTGTCTTACTCCTTTCAGATTGTGGGACTCACCTTCTCGCATTGATAGTCCAAATGCTTTGTTAAAAAGTGCTGCTAAAACATTCATAAATACACCATCCATAATGAAGAAGAAGAAAAGAAACCGAGACCTTTTATCTCCACTATCAGATAGAAGAATGGAGAAGAAACATGAGATTGACGTGACATCAACGTTGATCAGTAACTTTTCCCGTTTGGATGTCATGTTTGATGATATTGAGACTCAAGGTACTGAAGATGATAAAGAAAATTGTGGACAAGCTTGTAAGGTCAACGAGAAAGGTAACTCTCAGGAGAAGATTGACCAGCATCCTCTTGATGCCGATGCTAAGATGAAGGATGATATTGATACTGCTGCTGAAATTGTGCAGCAACCTTCTGGAGTTTTCGTTGAACATGATATGAATGATCTGTCGATGTATTCTCCTAATCAAATGGGTTTGAAATCAGACATTTTTCTAACATTAAGTGCTAGAAATCATAAAAAGTCAGTCTCGAGACTTAACTCTCCTTGTGTTCGATTAAAGGAGCACGAAAGGCTTTCAGTTTCTGTTACTTGTGTACAATCCGTTTGTTCATCATCAGGCGCAGGGGAGAATACGGGTGATCAAACGGGAAATGATGGTGGTTTTGAAACATGTAGCATTTTTGGTGGAACACCTTTTAGAAAAAGCTTTGAATCACCTTCAGCATGGAAATCTCCCCTGGTGTTCAGCACTTTTTTGTCTAGCCCCAGGATTGATACTGAAATTACAATCGAGGACTATGGATGTTTCTTTAGCCCGGGTGGTAAAGGCTATGATGCAATCGGATGGATGAAACACATCGGCGAACAAACTGCTGCTCAATATGCCAATGCTCAAGAGATTTTGGAAATTGAAACTCCTAAGGCGTTGCCAAAATACGCCTCTGGAAACGACCAGGAAAACATCGATCCTCACAATCAGCATGGGAACCATTCTAAGTCAGCTTCAAATGCTTTGGTTGAACGACGCATGCTTGACTTCAGTGAATGTGAAACTCCAGGCAAGGGTGATAAGGGAAAATCCTCAGCTATTTGTGTCTCAAGTCCTTCTTCATATTTGTTGAAGAGCTGTAGATAG 2718 0.3922 MGSERKITAPSDTAEDSVQKIRALHGRTTGPTRRSTKGQWTAEEDDILRKAVEQFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELIKGPWSKEEDETIIDLVNEYGPKKWSTIAQHLPGRIGKQCRERWHNHLNPSINKEAWTQEEELALIHAHQIYGNRWAELTKFLPGRTDNAIKNHWNSSVKKKLDSYLASGLLTQLQNVPLVGNPNQPIASSSARLQCSDDNGPRETEGEEISPCSQESVNAGYFSSGGELNIVAIQNGEEYRPNEESNQPSCSEPYYMSLEDVTRQEVYSSQFIEQKYSNEHGSSSTNADCEFNLHALPNISSLDFGQESSQLHNGSIAPSESHDMMIVPYGYQSSSLDNVKGEQNMLITDDECCRFLFSEAMSDECFSSGGVNNVDLSGCTSSLCQSSLPSGGRMMMYTAEANQLVASEDQQFVSREHDGLIYANDNNRIEDVVEDDNLKLVPVNSFDCGSDTNQTCYPVDEKPDVHAKQEETGGTLCYEPPRFPSLDIPFLSCIRQFLMSPMNCLTPFRLWDSPSRIDSPNALLKSAAKTFINTPSIMKKKKRNRDLLSPLSDRRMEKKHEIDVTSTLISNFSRLDVMFDDIETQGTEDDKENCGQACKVNEKGNSQEKIDQHPLDADAKMKDDIDTAAEIVQQPSGVFVEHDMNDLSMYSPNQMGLKSDIFLTLSARNHKKSVSRLNSPCVRLKEHERLSVSVTCVQSVCSSSGAGENTGDQTGNDGGFETCSIFGGTPFRKSFESPSAWKSPLVFSTFLSSPRIDTEITIEDYGCFFSPGGKGYDAIGWMKHIGEQTAAQYANAQEILEIETPKALPKYASGNDQENIDPHNQHGNHSKSASNALVERRMLDFSECETPGKGDKGKSSAICVSSPSSYLLKSCR 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03081 905 ProSiteProfiles Myb-like domain profile. 84 135 IPR001005 -
Car05g03081 905 PANTHER MYB PROTEIN-RELATED 5 416 - -
Car05g03081 905 PANTHER MYB PROTEIN-RELATED 491 904 - -
Car05g03081 905 SUPERFAMILY Homeodomain-like 86 182 IPR009057 -
Car05g03081 905 MobiDBLite consensus disorder prediction 839 862 - -
Car05g03081 905 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 139 IPR017930 -
Car05g03081 905 CDD SANT 40 83 IPR001005 -
Car05g03081 905 Gene3D - 89 140 - -
Car05g03081 905 ProSiteProfiles Myb-like domain profile. 32 83 IPR001005 -
Car05g03081 905 SMART sant 88 137 IPR001005 -
Car05g03081 905 SMART sant 140 188 IPR001005 -
Car05g03081 905 SMART sant 36 85 IPR001005 -
Car05g03081 905 MobiDBLite consensus disorder prediction 1 41 - -
Car05g03081 905 PANTHER TRANSCRIPTION REPRESSOR MYB5 491 904 - -
Car05g03081 905 Gene3D - 36 88 - -
Car05g03081 905 CDD SANT 143 183 IPR001005 -
Car05g03081 905 MobiDBLite consensus disorder prediction 846 862 - -
Car05g03081 905 Gene3D - 142 202 - -
Car05g03081 905 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 83 IPR017930 -
Car05g03081 905 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 140 190 IPR017930 -
Car05g03081 905 MobiDBLite consensus disorder prediction 216 237 - -
Car05g03081 905 Pfam Myb-like DNA-binding domain 37 83 IPR001005 -
Car05g03081 905 Pfam Myb-like DNA-binding domain 141 183 IPR001005 -
Car05g03081 905 Pfam Myb-like DNA-binding domain 89 135 IPR001005 -
Car05g03081 905 CDD SANT 91 135 IPR001005 -
Car05g03081 905 ProSiteProfiles Myb-like domain profile. 136 186 IPR001005 -
Car05g03081 905 PANTHER TRANSCRIPTION REPRESSOR MYB5 5 416 - -
Car05g03081 905 SUPERFAMILY Homeodomain-like 38 93 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03081 Car-Chr5 75609151 75615632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03081 4 905 MYB Transcription Factor Family AT4G32730 42.409 0.0 662
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Car05g03081 Myb_DNA-binding 1.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03081 - K09420 cam:101506533 1836.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03081 05 75609151 75615632 Car05g03081 05 75609151 75615632 ECH
Car04g03076 04 58808060 58811641 Car05g03081 05 75609151 75615632 PCT