Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03068 ATGATCGAGGTTGATGTGCTTGAACGTCTGGTGAAGAATGATCTCGGATGCTCACGCTGTGTACAGATCCGAAATTGGTTTGATTACAGGAATCACATATGCATTGTCTTTGAGAAGCTTGGACCAAGCTTATTTGATTTTCTAAAGAGAAATAAATACTGCCCATTCCCTGTGGATCTTGTTCGTGAATTCGGACGACAGCTTTTGGAATCTGTAGCATATATGCATGAACTACGGCTAATTCACACCGACCTGAAGCCAGAAAATATACTTCTTGTTTCTTCTGAATATGTAAAACTTCCAAGTTGTAAGAGGGTTTTGTCGGATGAAACACAATTTAGGTGCTTGCCCAAGTCTAGTGCTATTAAGCTGATTGATTTTGGCAGTACTGCATTTGCTAATCAGAACCATAGCTCCATTGTTTCTACAAGGCATTACAGAGCACCTGAGGTTATCTTAGGTTTAGGGTGGTCATCCCCGTGTGATTTGTGGAGTGTTGGATGCATTCTCATCGAATTATGCACGGGAGAAGCATTGTTTCAGACACACGAAAATTTGGAGCACCTGGCAATGATGGAGAGAGTTTTGGGACCTCTACCAGAGCATATGGTTCGGAAGTCTAAGGGTACAGAAAAATATTTCAAGCGTGGATCACGACTAAGATGGCCTGAAGGAGCTGTTTCAAGGGAGAGCATAAATGCAGTGAAGAAGCTTGGTCATCTTAAAGATATTATATCACGGCATGTAGAGTCCTCAAGGTCCTCCTTAACTGATCTGTTACATGGCTTATTAACATATAATCCGGCTGAACGTTTTACTGCTAGTGAAGCCCTTGATCATCCCTTCTTTAGGATTCCAACTTAA 864 0.4167 MIEVDVLERLVKNDLGCSRCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHELRLIHTDLKPENILLVSSEYVKLPSCKRVLSDETQFRCLPKSSAIKLIDFGSTAFANQNHSSIVSTRHYRAPEVILGLGWSSPCDLWSVGCILIELCTGEALFQTHENLEHLAMMERVLGPLPEHMVRKSKGTEKYFKRGSRLRWPEGAVSRESINAVKKLGHLKDIISRHVESSRSSLTDLLHGLLTYNPAERFTASEALDHPFFRIPT 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03068 287 ProSiteProfiles Protein kinase domain profile. 1 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g03068 287 Gene3D Phosphorylase Kinase; domain 1 2 39 - -
Car05g03068 287 CDD PKc_CLK 1 283 - -
Car05g03068 287 ProSitePatterns Serine/Threonine protein kinases active-site signature. 80 92 IPR008271 GO:0004672|GO:0006468
Car05g03068 287 PANTHER BNAA07G37640D PROTEIN 1 283 - -
Car05g03068 287 SMART serkin_6 1 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g03068 287 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 1 283 - -
Car05g03068 287 SUPERFAMILY Protein kinase-like (PK-like) 2 284 IPR011009 -
Car05g03068 287 Pfam Protein kinase domain 11 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g03068 287 Gene3D Transferase(Phosphotransferase) domain 1 13 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03068 Car-Chr5 75474816 75478456 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03068 55 283 Core Cell Cycle Gene Families AT2G38620 31.760 8.99e-24 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Car05g03068 Pkinase 1.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03068 K08287 - gmx:100782453 527.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03068 05 75474816 75478456 Car05g03068 05 75474816 75478456 ECH