Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03064 ATGGCAGCAACCGAATCAGATCTCGACGATTTCCTCAATCTCGATTACGAACTTCGCTATCCAACCCTTGCCGAGACGGAAGCATTCATGACCGGCGTTTGCTCCGCCGCTTTTCAAACTCTGTTACCGGATGTGGTGGCTTCATTTTCAACTTGTGGTGGACTAACAGACTCTCAAAATCTTACTTCCAAACATTCCACCATCACTGCCACTATTGATTCTCAGTCATCCATTTATGGCACTGTTGGAAGCCCAGTTTCAGTTTCAGCTAACAAACCAAACGGCAGAGAGAATCATACCAAAGGGACTACAAGTGGTTCCTCTGAGCCGTCTGATGAGGATGATGAAACAGGTCCTTGTGAACAAAGCACAAATCCACTTCATATGAAACGCCTTAGAAGAAAGGTTTCGAATCGGGATTCAGCCAGGAGGTCAAGGCAAAGAAAACAAGCTCATTTGGCTGAACTCGAGTCTCAGGTTGAAAAACTGAAACTGGAAAATGCAACCTTATACAAGCAGTTTAGTGATGCTAGTCAACAATTTCATGATGCGGATACAAATAACCGAGTGTTAAAATCAGATGTAGAAGCTTTGAGAGCTAAGGTGAAGTTAGCTGAGGATATGGTCACTAGGAGCTCTTTTAACACAACATTAAACAACCAGTTTCTTCATAATCAGTGTCAATTGAACACACCACCACAACTCAACTCGGCTACAATGCGCCGCATGTCACATGTTGCGCCAACCATCAATGTCCAGCAGGGAAATGGTATCTCATATGGCGGTGAACACAATTCAAATCTTGTTGGGTTTGGAAACTTGGACATGACTTACAACGATGTCGTCGACAATGGAGTTTTAAGCAATGCTTTGAGCTGTGTGACTATCTGGCCATAA 897 0.437 MAATESDLDDFLNLDYELRYPTLAETEAFMTGVCSAAFQTLLPDVVASFSTCGGLTDSQNLTSKHSTITATIDSQSSIYGTVGSPVSVSANKPNGRENHTKGTTSGSSEPSDEDDETGPCEQSTNPLHMKRLRRKVSNRDSARRSRQRKQAHLAELESQVEKLKLENATLYKQFSDASQQFHDADTNNRVLKSDVEALRAKVKLAEDMVTRSSFNTTLNNQFLHNQCQLNTPPQLNSATMRRMSHVAPTINVQQGNGISYGGEHNSNLVGFGNLDMTYNDVVDNGVLSNALSCVTIWP 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03064 298 SMART brlzneu 125 190 IPR004827 GO:0003700|GO:0006355
Car05g03064 298 MobiDBLite consensus disorder prediction 83 128 - -
Car05g03064 298 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 133 148 IPR004827 GO:0003700|GO:0006355
Car05g03064 298 Pfam bZIP transcription factor 129 176 IPR004827 GO:0003700|GO:0006355
Car05g03064 298 PANTHER BASIC LEUCINE ZIPPER 63 1 298 - -
Car05g03064 298 MobiDBLite consensus disorder prediction 83 107 - -
Car05g03064 298 PANTHER BZIP TRANSCRIPTION FACTOR 1 298 - -
Car05g03064 298 Gene3D - 129 185 - -
Car05g03064 298 Coils Coil 188 208 - -
Car05g03064 298 CDD bZIP_plant_GBF1 131 182 IPR045314 GO:0003700|GO:0006355
Car05g03064 298 SUPERFAMILY Leucine zipper domain 130 181 IPR046347 GO:0003700|GO:0006355
Car05g03064 298 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 128 180 IPR004827 GO:0003700|GO:0006355
Car05g03064 298 Coils Coil 139 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03064 Car-Chr5 75439319 75445161 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03064 73 298 bZIP Transcription Factor Family AT5G24800 45.532 1.10e-48 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car05g03064 bZIP_1 3e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03064 K25784 - gmx:778131 350.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03064 05 75439319 75445161 Car04g03078 04 58836500 58844513 PCT