Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03053 ATGGATCCACCAAAGAAACCTAACAAGATTAGAGAAATCGTTAGACTTCAACAGATCCTTAAGAAATGGAGAAGAATAGCTAATGCTTCAAAAACAagcagaagtaacaacagcagcagtagcagtactagtaAAGGCATAAAGTTTCTGAAAAGAACACTTTCAATGTCTGAACGTGATCAAGGAGGAGGATCAAGCAACGTGGTTCCCAAAGGTTACCTAGCTGTTTGTGTTGGGGTAGACCTTAACAGGTTTGTTATACCAACTGAGTATTTGGGTCATCAAGCCTTTCATATATTACTCAGAGAAACTGAAGAAGAATTTGGGTTTGAACAAACTGGTGTTCTGAGGATTCCTTGTGAAGTTTCTGTTTTTGAGAGTATCTTGAAGATGGTGGAGGGAAAGGATAACAGGCTTTCTACTCAGAAATGTAGGTTTGGTATTGAAAAGATGATGGGATACTGTTCCTCAAACCAGCTTGGTTATTCTCATCAGCCTCAAAGTCCTATGTGCAGTTAG 519 0.3622 MDPPKKPNKIREIVRLQQILKKWRRIANASKTSRSNNSSSSSTSKGIKFLKRTLSMSERDQGGGSSNVVPKGYLAVCVGVDLNRFVIPTEYLGHQAFHILLRETEEEFGFEQTGVLRIPCEVSVFESILKMVEGKDNRLSTQKCRFGIEKMMGYCSSNQLGYSHQPQSPMCS 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03053 172 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 171 IPR003676 GO:0009733
Car05g03053 172 PANTHER OSJNBA0060N03.10 PROTEIN 6 171 - -
Car05g03053 172 Pfam Auxin responsive protein 22 132 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03053 Car-Chr5 75354304 75354822 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03053 5 171 Calmodulin-binding Proteins AT4G31320 54.167 6.70e-58 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03053 K14488 - gmx:100500385 256.144