Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03049 ATGTGGTTACCAAAGAATCAATCAGAGAAGAAGGATGGTGGTGTAAATGGATTAATAGCAGTGGCAATAGACAAAGAAAAGGGGAGCCAAAATGCACTCAAATGGGCCATTGATAATCTCCTCTCAAGAAATTCAACTGTAATTCTCATCCATGTCAAAGTTTTGGCACCTTTTCTTTCTCCATCACCTTCTCTTTTCACCCTAAGGTCAGGGATAAGTATATTAAATAGTAATGAAAGTTTAACAATAGGTAAAGAAGCAGAAACTCAAAACAAAAACATTTTCCTTCCATATCGCGTCTTCTGCACGCGGAAAGATATTCAATGCAAGGATGTGTTACTTGAAGATGCAGATGTATCCAAAGCATTGATTGAATATGCTACTCAGGCAGGAATTGAGCATCTTGTTCTTGGCTCTTCAGCAAAAACTAGTTTGCTCAAAAGATTCAAGGTATCAGATATTCCTGGAACAGTATCAAAAGGGGCACCAGATTTCTGTACAGTCTATGTCATTGGCAAAGGAAAGATTCATTCGATGCGATCGGCTTCTCGTCCTGCTCCAACCATTTCCCCTCTACAAGTCAATCCAACTACTATCACACCATATCAATCAGACACAAATGTGGTGTTGTCACATAGTGAAAAAGAACAAGAAAGACATTCCTTTGACGATGGTGCACCGCATAAATCGCATGATGGAACAGAATCATTCACGTCACCATTCACTAGGAAAGGTTACAATGGCAAACAATATATGGAAAGTTCTATGACAGATAGTGATATATCCTTTATAAGCACTGGAAGGGCGAGTATCGACCGAATGTTACCTCCATTGTGTAACAACTCAGAGGCAGGAATGTCAAACCCAAGGCTATCAAGTAGCTCAGAACCAGATGGAAACTACAGCTTTGAATCTATTTATCAAGGAAAAATGTCTTCAGATTTCAGCATTCCTCCTGAATTTACATCACTCTCATTCGATAGCGAAAGACTTTCGTCTTCTTCATCACAAGCTGTGGATGACATGGAGGCTGAAATGAGGAGATTAAAGTTGGAGCTCAAGCAAACAATGGAAATGTACAATACAGCTTGTAAAGAAGCACTTACAGCACAACAGAAGGCGGTAGAACTTCAGCGCTGGAAATTAGAAGAAGAGAGGAAACTGGAAGAGGCGAGGCTAGCTGAGGAAGCTGCATTGGCAATTGCAGAAAAGGAGAAAGAAAAATCTAAAGCAGCCATTGAGGCTGCTGAAGCACAAAAGAGGATAGCAGAATTTGAAGCACAGAGAAGACTTCATGCAGAAATGAAAGCACTTAGAGAATCAGAAGAGAAGAAAAAAGTAATGGATGCTCTGGTAAATGTAGATATCAGGTATCGAAAGTATACGATCGAGGAGATCGAAGCTGCAACGAATTTTTTTTCGCAGTCTCTCAAGATTGGAGAAGGAGGATATGGTCCTGTTTTTAAGTGCCTTCTTGACCATACACCTGTTGCAGTTAAGGTTCTACGTCCCGATGCAGCTCAAGGAAGGTCACAGTTTCAACGAGAGGTTGAGGTACTGAGCTGCATACGACATCCAAACATGGTTCTTCTCTTAGGAGCATGTCCAGAATACGGCTGCTTAGTATACGAGTACTTGTCGAACGGAAGCTTAGACGACTGCTTGTTTCACAAAGGCAACAGCCCACCACTTTCTTGGCAGCGAAGGTTCAAAATCGCAGCCGAAATCAGCACTGGCTTGCTTTTCCTTCACCAGACAAAACCAGAACCTATAGTACACAGAGACTTAAAACCAGGAAACATATTGTTAGACAGAAATTATGTAGCCAAAATCAGCGATGTCGGTTTGGCAAGACTAGTTCCACCATCTATCGCCGACAGCGTGACACAATACCGGTTGACAGCAACAGCAGGAACATTCTGTTACATAGATCCTGAGTATCAGCAGACAGGAATGTTGGGTGTGAAATCAGACATATACTCACTTGGAATCATTTTCCTTCAAATTTTGACAGCAAAATCACCAATGGGTTTGGCACATAATGTTGAAAGAGCAATTGAGAAAGGAACTTTTACTGAGATGTTGGATCCTTCAGTGACTGATTGGCCACTAGAGGATGCATTGACCTTAGCAAAAATTGCAGTTCAGTGTGCTGAGTTAAGAAGAAAAGATAGACCTGATCTTGGTAAAGTTGTACTACCAGAACTTGATAGATTGAGAGATCATGCTGAAAATAGTGCTGAATATAGTGATCAATATTCAACACTTAATAGTAGCTCTGTAAATATGTCACATGAGAGACAAGTTTCACTACAGCTGGATGGATCTTGTCCTCCATTTCCTCACTCTGGGGAGATTAGAAGAAACACATCAGTTGGTGTTTGA 2385 0.4096 MWLPKNQSEKKDGGVNGLIAVAIDKEKGSQNALKWAIDNLLSRNSTVILIHVKVLAPFLSPSPSLFTLRSGISILNSNESLTIGKEAETQNKNIFLPYRVFCTRKDIQCKDVLLEDADVSKALIEYATQAGIEHLVLGSSAKTSLLKRFKVSDIPGTVSKGAPDFCTVYVIGKGKIHSMRSASRPAPTISPLQVNPTTITPYQSDTNVVLSHSEKEQERHSFDDGAPHKSHDGTESFTSPFTRKGYNGKQYMESSMTDSDISFISTGRASIDRMLPPLCNNSEAGMSNPRLSSSSEPDGNYSFESIYQGKMSSDFSIPPEFTSLSFDSERLSSSSSQAVDDMEAEMRRLKLELKQTMEMYNTACKEALTAQQKAVELQRWKLEEERKLEEARLAEEAALAIAEKEKEKSKAAIEAAEAQKRIAEFEAQRRLHAEMKALRESEEKKKVMDALVNVDIRYRKYTIEEIEAATNFFSQSLKIGEGGYGPVFKCLLDHTPVAVKVLRPDAAQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEYLSNGSLDDCLFHKGNSPPLSWQRRFKIAAEISTGLLFLHQTKPEPIVHRDLKPGNILLDRNYVAKISDVGLARLVPPSIADSVTQYRLTATAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTAKSPMGLAHNVERAIEKGTFTEMLDPSVTDWPLEDALTLAKIAVQCAELRRKDRPDLGKVVLPELDRLRDHAENSAEYSDQYSTLNSSSVNMSHERQVSLQLDGSCPPFPHSGEIRRNTSVGV 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03049 794 Gene3D HUPs 18 171 IPR014729 -
Car05g03049 794 SUPERFAMILY Protein kinase-like (PK-like) 456 732 IPR011009 -
Car05g03049 794 CDD STK_N 18 174 - -
Car05g03049 794 MobiDBLite consensus disorder prediction 748 771 - -
Car05g03049 794 Coils Coil 339 359 - -
Car05g03049 794 MobiDBLite consensus disorder prediction 281 299 - -
Car05g03049 794 ProSitePatterns Serine/Threonine protein kinases active-site signature. 591 603 IPR008271 GO:0004672|GO:0006468
Car05g03049 794 Gene3D Transferase(Phosphotransferase) domain 1 546 763 - -
Car05g03049 794 ProSiteProfiles Protein kinase domain profile. 473 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g03049 794 MobiDBLite consensus disorder prediction 212 231 - -
Car05g03049 794 Pfam Protein kinase domain 475 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g03049 794 Coils Coil 365 435 - -
Car05g03049 794 PANTHER UNIVERSAL STRESS FAMILY PROTEIN 9 793 - -
Car05g03049 794 SMART serkin_6 473 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g03049 794 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 19 149 - -
Car05g03049 794 MobiDBLite consensus disorder prediction 280 299 - -
Car05g03049 794 Pfam Universal stress protein family 19 149 IPR006016 -
Car05g03049 794 Gene3D Phosphorylase Kinase; domain 1 452 545 - -
Car05g03049 794 PANTHER OS02G0152300 PROTEIN 9 793 - -
Car05g03049 794 MobiDBLite consensus disorder prediction 747 794 - -
Car05g03049 794 MobiDBLite consensus disorder prediction 212 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03049 Car-Chr5 75331474 75336783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03049 1 763 Receptor kinase-like Gene Family AT1G78940 56.194 0.0 793
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Car05g03049 Pkinase 1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03049 - - gmx:100803867 1108.2