Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03045 ATGAAGCAGAATCTTGAATCTGTTTGGGGAAAACATCATGAGAAGCCAATGTCAGTTTACAAGATTCAGAAAATTCTTAATCCGGAAAGTAAATTTAGTCGCGGTGATATTGATAACGATAAGAAaaagtttaaggttttcacagaaagtcatgagtcatggaagaagaaaattcttgatccaggaagtgatatctttctgaaatggaaaagggcattcctattttcttgcatactatcactgtttgttgatccattgtttttctacctcccttctgtagcaatatcaactgataagaattcatcatgcatggatactgatttgaatttaggaatcattgtaacgtgtttccggacatttgctgatgttttctatacgctgaacatggtcataaagtttaggacagcttatgtctcaccaagttcaagggtttttgggagaggtgagcttgttacggatccagggttgattgctagaaggtatttgagatcagagtttttcttagatcttttagctgcattgcctcttcctcagattgttatttggttcattatgccagcaatcagaagctcccatgctgatcataccaacaatgctcttgtactgattgttctgattcaatatgtccccagattgtacatgatttttccattaagttcacagattgttaaagctaccggtgtcgtcacaaagactgcttgggctggagctgcttacaaccttgtactttacatgttagctagtcatgtattgggggcatcatggtatttgttgtcaattgaaaggcatgctacttgttggaaatctaaatgcagaaatgaaaacctccctgtgaaatgtgttcttaactacttggattgtagcactttgaacgacaatgatcgcatgaagtgggtgaatactacttctgtgttcagtaactgcaatcctgaAAGTAGCACTAGTTTCAACTATGGAATTTTTGGAATAGCAGTTGAAAATAAAGTTCTCTCCTCTGGTTTTATAGAGAAGTATCTCTATTGTTTGTGGTGGGGCTTGCAGAACTTGAGTTCCTATGGCCAGAATTTAAATACTAGCACATTTGTTGGGGAAACTGCATTTGCAATACTCATAGCTATCTTAGGTTTGGTTTTGTTTGCTCACTTAATTGGTAACATGCAGACCTATTTGCAATCTATTACTGTGAAACTTGAAGAGTGGAGGCTCAAGCGACGTGACACAGAAGAGTGGATGAGCCATCGCCAGCTCCCACCATTTCTCAGAGAGCGTGTCCGAAGATTTGTTCAGTACAAATGGCTTGCAACTCGAGGTGTTGACGAAGAAACAATCCTAAGAGGCCTCCCTACAGACCTGCGCAGAGATATCCAACGTCACCTTTGCTTAGACCTTGTTCGACGAGTTCCCTTTTTCTCACAAATGGATGATCAACTACTTGACGCGATATGCGAGCGATTGGTATCATCCTTAAGTACTCAAGGCACATACATTGTCAGAGAGGGAGATCCGGTAACCGAGATGCTTTTTATCATCAGAGGGAGACTCGAAAGCTCAACCACAAATGGTGGAAGAACTGGTTTCTTTAACTCAATTACCTTAAGGCCTGGTGAATTTTGTGGCGAAGAGTTACTTGCTTGGGCTTTGCTTCCAAAATCTACACTCAACTTGCCTTCTTCTACGAGAACGGTAAAAGCTCTTGTTGAGGTTGAAGCCTTTGCACTTAGAGCAGAAGATCTTAAATTTGTGGCAAATCAGTTTAGACGTCTGCACAGCAAGAAGTTGCAGCATACATTCCGTTTTTACTCTTACCATTGGAGGACATGGGCTGCTTGTTTCATTCAGGCTGCGTGGCGCAGGTTCAAGAAGAGAGTTTTAGCAAATAGCCTTAGCTTGAGGGAATACGAGTATTTCATCAATGAACAAGCAAGAGACCGAATGGAACGTGACGAAGAAGAGCGCGGACCTGTGACTTCTAACACTACACAAGTAAAACAGAATCTCGGTGTCACTATATTGGCTTCGAGATTTGCTACAAACACAAGGAAAGGGATTCAAAAGATCAAGGATGTAGAGATGCTCAAGTTGCAAAAGCCTGAAGAGCCAGATTTCTCAGTAGAGCCTGATGATGATTAA 2130 0.2615 MKQNLESVWGKHHEKPMSVYKIQKILNPESKFSRGDIDNDKKKFKVFTESHESWKKKILDPGSDIFLKWKRAFLFSCILSLFVDPLFFYLPSVAISTDKNSSCMDTDLNLGIIVTCFRTFADVFYTLNMVIKFRTAYVSPSSRVFGRGELVTDPGLIARRYLRSEFFLDLLAALPLPQIVIWFIMPAIRSSHADHTNNALVLIVLIQYVPRLYMIFPLSSQIVKATGVVTKTAWAGAAYNLVLYMLASHVLGASWYLLSIERHATCWKSKCRNENLPVKCVLNYLDCSTLNDNDRMKWVNTTSVFSNCNPESSTSFNYGIFGIAVENKVLSSGFIEKYLYCLWWGLQNLSSYGQNLNTSTFVGETAFAILIAILGLVLFAHLIGNMQTYLQSITVKLEEWRLKRRDTEEWMSHRQLPPFLRERVRRFVQYKWLATRGVDEETILRGLPTDLRRDIQRHLCLDLVRRVPFFSQMDDQLLDAICERLVSSLSTQGTYIVREGDPVTEMLFIIRGRLESSTTNGGRTGFFNSITLRPGEFCGEELLAWALLPKSTLNLPSSTRTVKALVEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSYHWRTWAACFIQAAWRRFKKRVLANSLSLREYEYFINEQARDRMERDEEERGPVTSNTTQVKQNLGVTILASRFATNTRKGIQKIKDVEMLKLQKPEEPDFSVEPDDD 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03045 709 ProSiteProfiles cAMP/cGMP binding motif profile. 469 552 IPR000595 -
Car05g03045 709 Gene3D Helix hairpin bin 396 460 - -
Car05g03045 709 SMART cnmp_10 469 600 IPR000595 -
Car05g03045 709 SUPERFAMILY cAMP-binding domain-like 398 591 IPR018490 -
Car05g03045 709 Gene3D - 86 395 - -
Car05g03045 709 SUPERFAMILY Voltage-gated potassium channels 61 391 - -
Car05g03045 709 Pfam Cyclic nucleotide-binding domain 492 580 IPR000595 -
Car05g03045 709 PRINTS EAG/ELK/ERG potassium channel family signature 129 138 IPR003938 GO:0005249|GO:0006813|GO:0016020
Car05g03045 709 PRINTS EAG/ELK/ERG potassium channel family signature 246 256 IPR003938 GO:0005249|GO:0006813|GO:0016020
Car05g03045 709 PRINTS EAG/ELK/ERG potassium channel family signature 364 375 IPR003938 GO:0005249|GO:0006813|GO:0016020
Car05g03045 709 PRINTS EAG/ELK/ERG potassium channel family signature 382 391 IPR003938 GO:0005249|GO:0006813|GO:0016020
Car05g03045 709 PRINTS EAG/ELK/ERG potassium channel family signature 432 439 IPR003938 GO:0005249|GO:0006813|GO:0016020
Car05g03045 709 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 33 705 - -
Car05g03045 709 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 14-RELATED 33 705 - -
Car05g03045 709 Pfam Ion transport protein 69 396 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Car05g03045 709 Gene3D Jelly Rolls 467 587 IPR014710 -
Car05g03045 709 CDD CAP_ED 469 600 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03045 Car-Chr5 75288675 75294860 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03045 43 705 Ion Channels AT2G24610 71.833 0.0 998
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03045 K05391 - gmx:100803334 1196.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g03045 05 75288675 75294860 Car05g03045 05 75288675 75294860 ECH