Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car05g03035 | ATGGATGAATATTCTGGTAAAAGAGCCACTGATGGGGTGGTAGTCCCTAAAAAGGGTATGGGCAACATGTTTAAAGATACTGCCAATACTAGAGATAGAAATGGTCAAGTATGTAGCCGTCTTGGTTGCAGCAGCAGAGTCAACTCTCCTAAAGGTGCTCAAATCGGTTCTTCTGAAAAGGGTAAATCTTTGAGGCCTTCATTTAGGTACTCTTCAACTGGCAAGGAAACAATTGGAAGCTCCTCTAAAACATTCTCTGGGAGTAGTAACCCAAGAAAACCCCTTAAAAAGCCTCAGAAAACATTACCTATAGAGACAGATTCATCTGAAACTAGTAGTGTACAAGATGAACCAGAAGTTTCGAAGCTAGTACCTCCACCTGAAAAAAATAAGAGGGGGATTCAAGCTGAAGGAGAAAACTCAGAGTCCAGTAATGTCACGCTGATGGAAGTAGGGAGTTCTAGTTTAGCATCTAATACAAGATCTAGGAGGAATTTTCATCCTAAACCTGGATTACGTAGTCAAGAAATTCAAAGTACTGGTCCAGGGACACGTGCTGGTACCAGTAGGTATGGGTTAAGGAACCTAAGATGCAACTCCATCTCTGATGTTATCCCTGCCGGTTGTACACCATCAGATTCAACCCTCAACAGAAGGAAGGATGCTATAAAAAAGAGAAATTGTGACGGGGAAAGTAGTTCTACAGCTAGAGGGAAGAAAATTAACGGGCCCTCGGTAGAAGGGCGGAATTCTGTTTCGAGAAACGGCATATCTATCTCCGATTCAAGAATATCTAGAAATAACCCTCACAGGGACAGACCCGACAGCAATTTAGTGTCTGTTAGAACACGGAGATCAGTTGGTGGTCATGCTAGGGGAAGACTTTCTGGCCAAGGAAATGCTAATCATGTAGCACCTAATCAGTCCCTTATTATGATACCTTCTTTTTCTCATTCTGGCAATCTTAATGCTCCTGGTGTACAACATCATGCTTCTCTAGAGACTCCTTCAAGTCCAAGCTCTTACAGTGGAGCAGGTACTAGCAGTGAGGAGTTATATGGTGTTATGCCGGGGTCTCCTGTTGAATATGGCCTCACTCATTCTCTAATAAATCGGGATGGCTTTCGACGTCGCTACAACATGGATGGTATTGCCGAGGTATTGTTGGCACTTGAGAGGATTGAACAAGATGTTGAGCTTACACACGAGcaaattcttatgttggagtccaacttgttccttactggactaaacttctatgaccagcacagagacatgcggttggacattgataatatgtcttatgaggaactactggctctggaagagaggatgggcactgtgagcaccgctgtaacagaggaAGCTCTATCAGAATGCCTAAAGAGAAGTTTCTATCAATCCTCACCCTCAAACAATGCAGCTAAGAGTTGCAATGAGAATAAGGATGATATCAAATGCAGCATCTGCCAGGAGGAATATGTGGTGGCAGATGAATTAGGGAGTCTACAGTGTGAGCACAAGTATCATTTGGTGTGCATACAGCAGTGGCTACGGCTAAAGAACTGGTGCCCTATTTGCAAAGCATCGGTGGCAACGTCAAGTTCATCCTCATCCCACTAG | 1623 | 0.3937 | MDEYSGKRATDGVVVPKKGMGNMFKDTANTRDRNGQVCSRLGCSSRVNSPKGAQIGSSEKGKSLRPSFRYSSTGKETIGSSSKTFSGSSNPRKPLKKPQKTLPIETDSSETSSVQDEPEVSKLVPPPEKNKRGIQAEGENSESSNVTLMEVGSSSLASNTRSRRNFHPKPGLRSQEIQSTGPGTRAGTSRYGLRNLRCNSISDVIPAGCTPSDSTLNRRKDAIKKRNCDGESSSTARGKKINGPSVEGRNSVSRNGISISDSRISRNNPHRDRPDSNLVSVRTRRSVGGHARGRLSGQGNANHVAPNQSLIMIPSFSHSGNLNAPGVQHHASLETPSSPSSYSGAGTSSEELYGVMPGSPVEYGLTHSLINRDGFRRRYNMDGIAEVLLALERIEQDVELTHEQILMLESNLFLTGLNFYDQHRDMRLDIDNMSYEELLALEERMGTVSTAVTEEALSECLKRSFYQSSPSNNAAKSCNENKDDIKCSICQEEYVVADELGSLQCEHKYHLVCIQQWLRLKNWCPICKASVATSSSSSSH | 540 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car05g03035 | 540 | Coils | Coil | 391 | 411 | - | - | |
Car05g03035 | 540 | MobiDBLite | consensus disorder prediction | 217 | 233 | - | - | |
Car05g03035 | 540 | Pfam | Ring finger domain | 486 | 528 | IPR001841 | - | |
Car05g03035 | 540 | SUPERFAMILY | RING/U-box | 480 | 533 | - | - | |
Car05g03035 | 540 | MobiDBLite | consensus disorder prediction | 209 | 301 | - | - | |
Car05g03035 | 540 | MobiDBLite | consensus disorder prediction | 172 | 186 | - | - | |
Car05g03035 | 540 | MobiDBLite | consensus disorder prediction | 322 | 348 | - | - | |
Car05g03035 | 540 | ProSiteProfiles | Zinc finger RING-type profile. | 487 | 528 | IPR001841 | - | |
Car05g03035 | 540 | MobiDBLite | consensus disorder prediction | 1 | 191 | - | - | |
Car05g03035 | 540 | MobiDBLite | consensus disorder prediction | 27 | 95 | - | - | |
Car05g03035 | 540 | MobiDBLite | consensus disorder prediction | 234 | 264 | - | - | |
Car05g03035 | 540 | MobiDBLite | consensus disorder prediction | 102 | 118 | - | - | |
Car05g03035 | 540 | MobiDBLite | consensus disorder prediction | 122 | 136 | - | - | |
Car05g03035 | 540 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE ATL44-RELATED | 1 | 532 | - | - | |
Car05g03035 | 540 | MobiDBLite | consensus disorder prediction | 137 | 165 | - | - | |
Car05g03035 | 540 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF165 | 1 | 532 | IPR045191 | GO:0061630 | |
Car05g03035 | 540 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 448 | 534 | IPR013083 | - | |
Car05g03035 | 540 | MobiDBLite | consensus disorder prediction | 265 | 279 | - | - | |
Car05g03035 | 540 | SMART | ring_2 | 487 | 527 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Car05g03035 | Car-Chr5 | 75210707 | 75216569 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Car05g03035 | 373 | 528 | C3H Transcription Factor Family | AT2G15530 | 42.949 | 1.13e-34 | 137 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car05g03035 | - | - | gmx:100787213 | 783.867 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Car05g03035 | 05 | 75210707 | 75216569 | Car05g03035 | 05 | 75210707 | 75216569 | ECH | |
Car04g03100 | 04 | 59138098 | 59140201 | Car05g03035 | 05 | 75210707 | 75216569 | PCT |