Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g03014 ATGGCGGTGAAACCAACCAAAGCCGAGAAGAAAATCGCTTACGATTCTAAGCTCTGCCAACTTCTCGATGACTACTCTCAAATTCTTGTTGTCCACGCTGATAACGTTGGATCCAATCAGCTACAGAGCATTCGTAGCGGTCTACGTGGTGACTCGGTTGTTCTCATGGGAAAGAACACTATGATGAAGCGTTCTATTCGTATTCACGCTGAGCAAACCGGCAACAAGACCTTTCTCAACCTTATTCCCCTTCTTGTCGGAAATGTAGGTTTGATTTTCACCAAAGGTGACTTGAAGGAAGTTAGCGAAGAGGTTGCTAAGTACAAGGTGGGCGCTCCTGCTCGTGTTGGTTTGGTTGCTCCAATTGATGTCGTTGTTCCTCCAGGCAACACAGGTCTCGACCCCTCTCAGACCTCTTTCTTCCAGGTCCTCAACATTCCTACCAAGATTAACAAGGGTACTGTCGAAATCATTACCCCTGTGGAACTCATTAAGAAAGGAGACAAGGTTGGATCTTCTGAAGCTGCATTGCTTGCCAAGTTGggcataaggcccttttcctatgggcttgtggtcctttctgtttatgacaatggttcagtgtttagccctgaggttcttgacctcactgaggatgccctcattgagaaatttgcTATTGGGGTCTCTATGGTTACCTCACTCTCATTGGCCATCTCATACCCAACACTTGCTGCTGCTCCTCACATGCTTGTCAATGCCTACAAGAACGTTCTTGCTGTAGCAGTTGCTACAGAATACTCTTCCCCTGAGGCAGACAAGGTTAAGGAGTACTTGAAGGACCCAAGTAAATTtgctgtagctgcagttgctgcaccagctgctgctgcttccggtgctgcccctgctgctgcCTCCAAGGAGGAGGCAAAGAAGGAAGAGCCAGCTGAAGAATCCGATGACGACATGGGTTTCAGTCTGTTTGATTAA 969 0.3829 MAVKPTKAEKKIAYDSKLCQLLDDYSQILVVHADNVGSNQLQSIRSGLRGDSVVLMGKNTMMKRSIRIHAEQTGNKTFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDALIEKFAIGVSMVTSLSLAISYPTLAAAPHMLVNAYKNVLAVAVATEYSSPEADKVKEYLKDPSKFAVAAVAAPAAAASGAAPAAASKEEAKKEEPAEESDDDMGFSLFD 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g03014 322 Gene3D - 114 185 IPR043164 -
Car05g03014 322 MobiDBLite consensus disorder prediction 292 322 - -
Car05g03014 322 PIRSF L10E 1 322 IPR030670 GO:0042254
Car05g03014 322 Pfam Insertion domain in 60S ribosomal protein L10P 114 183 IPR040637 -
Car05g03014 322 SUPERFAMILY Ribosomal protein L10-like 8 134 IPR043141 -
Car05g03014 322 CDD Ribosomal_P0_L10e 9 185 - -
Car05g03014 322 Pfam 60s Acidic ribosomal protein 234 321 - -
Car05g03014 322 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0-1 1 322 - -
Car05g03014 322 Gene3D - 6 209 IPR043141 -
Car05g03014 322 Pfam Ribosomal protein L10 7 108 IPR001790 -
Car05g03014 322 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 1 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g03014 Car-Chr5 74981985 74984421 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g03014 1 321 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 83.178 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g03014 K02941 - csv:101214032 531.946