Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02998 ATGAGTAAAGTAAATAGTAAATTGTGTGCCAAACATGAAGAGCGTACTGTAAGAATTACTAGATCAAGGGCAAGAACTTTAGGAGGAGGGGTTCCTCCTCTTCCTCCTTCATACTCAAGACCCTCTTCTAAGAATGAAGCGAAAAATGTTCACAGAGCAACAAGTTCCAAAAGAGCTGTTTCTTCTTTGGAGAATCAAACTTGTGTGCTTGCTCCTCCGCGTAAGAGAAGGGCAGTGCTTACTGATGTTACTAACGTCACCACAAAATCGCGTGATACATGTGTTAAAGAATCAAAATTTCAGGTCAAAGGAGTTTACCAGAAGAAAAACACAAAGATAACTTCAAATGTCTCCGTTGGAGTTTCTCTTTCATCAACACAAGAGGATGTTAAACCGAAGTTAGCTGAAGCATTGTCTACAATAAAGATGGAAGAGTTAAATGACACCATTGCTGCAGTAACTTTGGATAAAGAGCCAGCTGAACATTGTATGTCCAATAGCATAAGAGAACATGTTATGACAGACGCCACACTTTCAATGCAAGACTCTGCGAACTCTGTTGAGTTCCCAAGCTCTCCAAACAAAGATATAAATATGACATGTGATAAGCAAGAAGCCTCGGATTGCCTGACCATTGTGGACATTGATATAGAGATGAAGGATTCTCAAGTTTGGAGTGCTTATGCCCCTGATATATACGGCAAGGCTCGTGTTACCGAGCTTGAAAGGAAACCATCAACCAACTACATGGATAAGTTGCAGCAAGATATTTCTCCAAACATGCGCGGAATTCTGGTAGATTGGCTTGTGGAGGTTTCTGAGGAATATAAGTTGGTTCCAGACACTCTTTACCTTACCGTGAACCTCATTGATCGGTTTCTCTCAACAAAATTGATTCAGAAACACAGGCTCCAGTTGCTCGGCGTTACTTGCATGTTCATTGCATCGAAGTACGAAGAGATCTGTGCTCCTCGAGTTGAGGAATTTTGCTTCATCACTGATAACACATACACAAAAGAAGAGGTAGTGAGAATGGAGAGTGAAGTTCTAAACCTTCTACGTTTTCAGTTATGTGTTCCCACAACCAAAACATTTCTCAGGAGATTCATCCAAGCAGCACAATCTTCTTACAAGGTTCCTCGAATTGAATTGGAATTCTTGGCAAATTATTTAGCAGAGCTCACTCTTGTTGAGTACAACTACTTACAATTTCTACCTTCCCTTGTGGCTGCTTCTGCTGTATTCCTTGCTAGATGGACCCTCGACGACTCCAAACATCCATGGACTCCAACTCTGGAGCATTATACAAACTACAAAGCTTCAGAGCTAAAAATAGTTGTTCTTGCATTGGAAGATCTGCAACTTAATACCAAAGCTTGCTCCCTCAATGCTATTCGTGAGAAATATAAACAAGACAAGTTCAATTGTGTGGCAAAACTGTCTCCAAAACCAGTGCAGTCATTGTTCCAAGCTCAAGTGTAA 1482 0.4082 MSKVNSKLCAKHEERTVRITRSRARTLGGGVPPLPPSYSRPSSKNEAKNVHRATSSKRAVSSLENQTCVLAPPRKRRAVLTDVTNVTTKSRDTCVKESKFQVKGVYQKKNTKITSNVSVGVSLSSTQEDVKPKLAEALSTIKMEELNDTIAAVTLDKEPAEHCMSNSIREHVMTDATLSMQDSANSVEFPSSPNKDINMTCDKQEASDCLTIVDIDIEMKDSQVWSAYAPDIYGKARVTELERKPSTNYMDKLQQDISPNMRGILVDWLVEVSEEYKLVPDTLYLTVNLIDRFLSTKLIQKHRLQLLGVTCMFIASKYEEICAPRVEEFCFITDNTYTKEEVVRMESEVLNLLRFQLCVPTTKTFLRRFIQAAQSSYKVPRIELEFLANYLAELTLVEYNYLQFLPSLVAASAVFLARWTLDDSKHPWTPTLEHYTNYKASELKIVVLALEDLQLNTKACSLNAIREKYKQDKFNCVAKLSPKPVQSLFQAQV 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02998 493 SUPERFAMILY Cyclin-like 221 358 IPR036915 -
Car05g02998 493 PANTHER CYCLINS 54 489 IPR039361 -
Car05g02998 493 Pfam Cyclin, C-terminal domain 360 482 IPR004367 -
Car05g02998 493 SUPERFAMILY Cyclin-like 359 482 IPR036915 -
Car05g02998 493 CDD CYCLIN 359 450 IPR013763 -
Car05g02998 493 MobiDBLite consensus disorder prediction 25 61 - -
Car05g02998 493 PIRSF Cyclin_A_B_D_E 37 492 IPR039361 -
Car05g02998 493 ProSitePatterns Cyclins signature. 262 293 IPR006671 -
Car05g02998 493 Gene3D - 245 358 - -
Car05g02998 493 PANTHER CYCLIN-A2-4 54 489 - -
Car05g02998 493 SMART cyclin_7 267 351 IPR013763 -
Car05g02998 493 SMART cyclin_7 364 452 IPR013763 -
Car05g02998 493 Pfam Cyclin, N-terminal domain 232 358 IPR006671 -
Car05g02998 493 Gene3D - 231 479 - -
Car05g02998 493 CDD CYCLIN 261 350 IPR013763 -
Car05g02998 493 SMART Cyclin_C_2 360 483 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02998 Car-Chr5 74854769 74861076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02998 10 489 Core Cell Cycle Gene Families AT5G25380 51.143 1.40e-147 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02998 K06627 - gmx:100807750 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03150 04 59684710 59690118 Car05g02998 05 74854769 74861076 PCT