Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02997 ATGGCGTTACTAAGAATGGTTCAATCTCACTCTCACTCTCAGCacaacaacaacaacaacgacaacGGTGGGACCCACCACTTGCTCAATCCAGTACTCCATGATTTTCTCGGCATGAAACCATCTGATACTTCCGCCGATGTTAGGTTACCGGAGACATCAGTCTCAGCTTCCTCCGCCGGTGCACGTGGCCCTTTTTCCACCACCTCTGAAACTGTTTCTGAAAAGCAGGTAGGGAATCATCTTGAGGGAGTTCCATTCTATGGCCCAAGAAGTGATTTTACTGGCACTGAGATAAGTAACAGACTAGTGGGGAACAAGAGAAGTAATTCTGATTCTTCTTTTATGGGTTCCTCCAGAGATGCCTTCCAAATGGTCCCTGACTCCTTTCAAAACTCACATTTGATGAAGGTCCTCCGAAATGCGTTTGGCGGAGAGAGGTCTAGAAGGCCTAATGACGATGAAGTGTTACATGCTATGCAGTCAATGAAGCCATCTTCTAGTTCTCAGATATTTCATCCTCCATCCACCACTAAGCTTGATGCAAACAAATGGGAACGGTCTATTCTCACGAACATTGGCCCTTCTATGCAGCATCCTCCGCGTGGAGGGCAGTTGATGACTCCTCTTGCACACCAATTAGCTTCAAATAAGATTAGGGATACCAATGCCGGTCCTTCATTTATCTCTCAGTCTGCTGCTGATGAAGGATCAAGAACCGGAATCAAAGGCCCCGGAGTTTTAAGTTCCATAAACACATCTGCTACTGCTACTGATAAAATTTCATCTGCAGTGCTACTCGGCGGAAGCAGGCCAAAACCTCTAACGAATATAGTAGAATCATTCACACCCCCAAGTCAACACGGGCTAACATCTGCCAGCCGCCAGATGACTATTTTTTACGGAGGTCAAGCGCATGTTTTTGATGATGTCCACCCACATAAGGTCTGA 951 0.4532 MALLRMVQSHSHSQHNNNNNDNGGTHHLLNPVLHDFLGMKPSDTSADVRLPETSVSASSAGARGPFSTTSETVSEKQVGNHLEGVPFYGPRSDFTGTEISNRLVGNKRSNSDSSFMGSSRDAFQMVPDSFQNSHLMKVLRNAFGGERSRRPNDDEVLHAMQSMKPSSSSQIFHPPSTTKLDANKWERSILTNIGPSMQHPPRGGQLMTPLAHQLASNKIRDTNAGPSFISQSAADEGSRTGIKGPGVLSSINTSATATDKISSAVLLGGSRPKPLTNIVESFTPPSQHGLTSASRQMTIFYGGQAHVFDDVHPHKV 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02997 316 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 60 315 IPR040390 -
Car05g02997 316 MobiDBLite consensus disorder prediction 43 77 - -
Car05g02997 316 MobiDBLite consensus disorder prediction 7 26 - -
Car05g02997 316 PANTHER PROTEIN TIFY 8 60 315 - -
Car05g02997 316 MobiDBLite consensus disorder prediction 47 77 - -
Car05g02997 316 SMART tify_2 290 316 IPR010399 -
Car05g02997 316 ProSiteProfiles Tify domain profile. 290 316 IPR010399 -
Car05g02997 316 Pfam tify domain 292 316 IPR010399 -
Car05g02997 316 MobiDBLite consensus disorder prediction 1 28 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02997 32 316 Tify Gene Family AT4G32570 38.158 1.18e-49 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Car05g02997 tify 6.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02997 - - gmx:100819293 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02997 05 74839821 74844392 Car05g02997 05 74839821 74844392 ECH