Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02982 ATGTTGATGTACGAAAGCCACAACGAGGTTTCAGATGACGATGATGATAACAAAATCGCACGAAGTGATGATGATTTATTTAATAGTCCAGATCTGGTGAATGCAACGTCAAGGTTTGAATTCGATGGCAGCCAATATAGTCTCACCGGTTTTCCTTTTCCTTTTCTCGGTATCCACGGTCCAGAAAAACCTAAGGTCCGTGATGGCATTATCTCCCCCAATAACCCTTTTTATAGGTTGTGGAATGCTTTTTTGGTGGTGTTGGTTTTCTACACTGCATGGGTGACTCCGTTTGAATTTGGGTTTTTAAATGAACCGTGGAAAGCACTTTCGATTACTGATAATGTTGTGAATGGTATTTTTTTCATTGATATTTGTGTGACTTTCTTTGTTGCGTACTATGACAAGGCTGCGTATTTGCTTGAGGATAGACATAGCTATATTGCAAAGAGGTATCTCAAATCATGGTTTATACTTGACCTCATCTCCACAGTTCCTTCTGAATTAGCCCGCAAAGTGATGCCTAATGATCTCAAGAGTTATGGCTACTTCGGCATGCTTCGCCTTTGGCGCCTTATGAGAGTCAGTCGCATGTTTACTAAGTTAGAAAAGGACAGACATTTTAATTACTTTTTGCTGCGTTGTTCAAAGCTTACGTGTGTTATTCTATTTGCAACCCATTTTTCTGCCTGCATTTTTTACTTTCTTGCCGACAATTATCCCAGAAGCACAACGTGGCTTGGGCTTGTTTCTAACGTGGCTGACATGAATATTATGAGTCTCTACGTAACATCAGTATACTGGTCTATAGTCACTCTTTCAACAGTTGGTTATGGCGATCTTCATCCTACAAATACAAAGGAGATGATATTTGACATTTTCTATATGCTCTTTAATCTGGGACTTACCGCATACCTCATTGGGAACATGACAAATTTAATTGTTCATGCAACGAGCAGAACTAGAAAATATAGGGATACAGTAAAAGCTGCAACAAGTTTTGCCCGCCGGAATAACATACCGGTCCGCTTGGAAGAACAAATGCTTGCTCATTTGTTTATGAAGTACAGAACTGATTTAGAAGGAGTACAACATCAGGAGGCTATTGATTGCCTTCCGAAAGCCATTCGAGCTAATATCTCACACTTCTTATTCTATCATCTTATGGAAAGAGTATACTTGTTTAATGGAGTGTCACAAGACCTACTTTTTCAATTGGTCACAGAGATGAAGGCTGAGTATTTTCCTCCAAAGGAAGATGTGGTTTTGGATAATGAAGCACCAACAGACTTTTACATCATTGTCAATGGCAGTGCAGAACTTATCCAACGAAGGGATGGAATAGAACGTGTCATTGGTCAGATAGGTGTAGGAGAATTAGTTGGTGACATAGGAGTCCTATGTTACAGGCCGCAGCCATATATAGCCCGGACTAAACGACTGAGCCAAATTTTGCGCCTGAGTCGCACTACGTTTCTAAATCTTATTCATTCAAGTGTTGGAGATGGGACTATAATCATGAACAACTTTCTCAACCATTTGCAAAATTCCCCCATTGAAGGGATGAAGGTTATTTTGGCAGAAACAGAGGCGATGTTGGCTCGTGGTAAAACTGATCTACCTATCAGCACATGCTTTGCAGCAAATAGAAATGACAATATATTGTTACATCGGTTGTTGAAGAAAGGCTCAAATCCAAATGAAGCTGACAAGAATGGAAAGACAGCAATGCATATCGCAGCTTTTAATGGCAATGAGCATTGTATAACTTTGCTTCTACAGTTTGGTGCTGACCCAAATAGCAAAGATTTGGATGGAAGTGTCCCGCTATGGGAAGCAATGGTTGGTGGACATAAATCTATCAAGAAAATTCTCATAGACAGTGGTGCGGACATATTTTGTACTGATGTTGGGCATCTCGCATGCCATGCAGCAGAAAACAACAACATTGAATTGCTTAAAGAACTCATAGAATACGGTGTGGATGTGACAAAACCCGAAAGTAGTGGAACCACTGCCCTGCATGCAGCAGTATGTGAAGGAAATGCAGAGATAGTCAAGTTTCTTTTAGACCAAGGAGCTGAAGTTGATAAGCCAAATGGTAGTGGTTGGACTCCCAGGTCTTTGGCAGAACATCAAGGCCATGAAGAAATTAAAAATATATTCCAAAACATCCAAGAGAACAAAAAAACAACGCCTGTTATTCTAATACCAGAATATGGGAAGCCTAATATGTCTTGCATGGGAAGGTTCCAAAGTGAACCTGCTATGCCTGGTGTTCTTGGATCCCAAGAAAGCATGCAACAACCACCTAACCAAGAAGTTTCGGCATGGCTTGATAGTCATCGAAGAAGGGCCAACACCTTTAATAATTCAATTTTTGGGATTATCTCAGCTGCCAGACGATATAAAAAAGAACGTAAGGAATCTGAAAGCAGAGGTAATAATATAAGGAGCATGAATGGAGTAGTAGCTAGGGTGACACTTTATTGTCCTGAAAAAGGTGAACATGCTAGAAAGCTTGTTTTTCTGCCCAAGTCACTTGAAGAACTGTTACACATTGGTGCCAAAAAGTTTGATATCTCACCCACCAAAATTTTGAACAGAGAAGGAGCTGAAATTGATGATATAGATCTTATAAGAGATGGTGATCACCTTGTTATTGCACGAGACTGA 2676 0.4013 MLMYESHNEVSDDDDDNKIARSDDDLFNSPDLVNATSRFEFDGSQYSLTGFPFPFLGIHGPEKPKVRDGIISPNNPFYRLWNAFLVVLVFYTAWVTPFEFGFLNEPWKALSITDNVVNGIFFIDICVTFFVAYYDKAAYLLEDRHSYIAKRYLKSWFILDLISTVPSELARKVMPNDLKSYGYFGMLRLWRLMRVSRMFTKLEKDRHFNYFLLRCSKLTCVILFATHFSACIFYFLADNYPRSTTWLGLVSNVADMNIMSLYVTSVYWSIVTLSTVGYGDLHPTNTKEMIFDIFYMLFNLGLTAYLIGNMTNLIVHATSRTRKYRDTVKAATSFARRNNIPVRLEEQMLAHLFMKYRTDLEGVQHQEAIDCLPKAIRANISHFLFYHLMERVYLFNGVSQDLLFQLVTEMKAEYFPPKEDVVLDNEAPTDFYIIVNGSAELIQRRDGIERVIGQIGVGELVGDIGVLCYRPQPYIARTKRLSQILRLSRTTFLNLIHSSVGDGTIIMNNFLNHLQNSPIEGMKVILAETEAMLARGKTDLPISTCFAANRNDNILLHRLLKKGSNPNEADKNGKTAMHIAAFNGNEHCITLLLQFGADPNSKDLDGSVPLWEAMVGGHKSIKKILIDSGADIFCTDVGHLACHAAENNNIELLKELIEYGVDVTKPESSGTTALHAAVCEGNAEIVKFLLDQGAEVDKPNGSGWTPRSLAEHQGHEEIKNIFQNIQENKKTTPVILIPEYGKPNMSCMGRFQSEPAMPGVLGSQESMQQPPNQEVSAWLDSHRRRANTFNNSIFGIISAARRYKKERKESESRGNNIRSMNGVVARVTLYCPEKGEHARKLVFLPKSLEELLHIGAKKFDISPTKILNREGAEIDDIDLIRDGDHLVIARD 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02982 891 ProSiteProfiles KHA domain profile. 826 891 IPR021789 -
Car05g02982 891 Gene3D - 80 316 - -
Car05g02982 891 Pfam KHA, dimerisation domain of potassium ion channel 826 888 IPR021789 -
Car05g02982 891 ProSiteProfiles Ankyrin repeat profile. 669 701 IPR002110 GO:0005515
Car05g02982 891 ProSiteProfiles cAMP/cGMP binding motif profile. 394 513 IPR000595 -
Car05g02982 891 CDD CAP_ED 394 497 IPR000595 -
Car05g02982 891 ProSiteProfiles Ankyrin repeat region circular profile. 669 697 - -
Car05g02982 891 PANTHER POTASSIUM CHANNEL AKT1 41 890 IPR045319 GO:0005249|GO:0006813
Car05g02982 891 PRINTS EAG/ELK/ERG potassium channel family signature 91 98 IPR003938 GO:0005249|GO:0006813|GO:0016020
Car05g02982 891 PRINTS EAG/ELK/ERG potassium channel family signature 114 124 IPR003938 GO:0005249|GO:0006813|GO:0016020
Car05g02982 891 PRINTS EAG/ELK/ERG potassium channel family signature 262 279 IPR003938 GO:0005249|GO:0006813|GO:0016020
Car05g02982 891 PRINTS EAG/ELK/ERG potassium channel family signature 288 299 IPR003938 GO:0005249|GO:0006813|GO:0016020
Car05g02982 891 PRINTS EAG/ELK/ERG potassium channel family signature 306 315 IPR003938 GO:0005249|GO:0006813|GO:0016020
Car05g02982 891 ProSiteProfiles Ankyrin repeat profile. 572 604 IPR002110 GO:0005515
Car05g02982 891 ProSiteProfiles Ankyrin repeat region circular profile. 605 632 - -
Car05g02982 891 Pfam Cyclic nucleotide-binding domain 414 498 IPR000595 -
Car05g02982 891 SMART cnmp_10 394 511 IPR000595 -
Car05g02982 891 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 41 890 - -
Car05g02982 891 SUPERFAMILY cAMP-binding domain-like 319 515 IPR018490 -
Car05g02982 891 SUPERFAMILY Voltage-gated potassium channels 74 315 - -
Car05g02982 891 ProSiteProfiles Ankyrin repeat profile. 605 637 IPR002110 GO:0005515
Car05g02982 891 Gene3D Jelly Rolls 360 519 IPR014710 -
Car05g02982 891 SMART ANK_2a 572 601 IPR002110 GO:0005515
Car05g02982 891 SMART ANK_2a 847 876 IPR002110 GO:0005515
Car05g02982 891 SMART ANK_2a 669 698 IPR002110 GO:0005515
Car05g02982 891 SMART ANK_2a 535 568 IPR002110 GO:0005515
Car05g02982 891 SMART ANK_2a 605 634 IPR002110 GO:0005515
Car05g02982 891 SMART ANK_2a 636 665 IPR002110 GO:0005515
Car05g02982 891 Gene3D - 541 724 IPR036770 -
Car05g02982 891 Pfam Ankyrin repeats (3 copies) 546 636 IPR002110 GO:0005515
Car05g02982 891 Pfam Ankyrin repeats (3 copies) 643 718 IPR002110 GO:0005515
Car05g02982 891 PRINTS Ankyrin repeat signature 573 588 IPR002110 GO:0005515
Car05g02982 891 PRINTS Ankyrin repeat signature 685 699 IPR002110 GO:0005515
Car05g02982 891 ProSiteProfiles Ankyrin repeat region circular profile. 572 603 - -
Car05g02982 891 Pfam Ion transport protein 79 321 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Car05g02982 891 SUPERFAMILY Ankyrin repeat 545 724 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02982 Car-Chr5 74737299 74742036 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02982 44 890 Ion Channels AT4G32500 53.513 0.0 915
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02982 K21867 - gmx:100786870 1132.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02982 05 74737299 74742036 Car05g02982 05 74737299 74742036 ECH
Car04g03165 04 59910233 59916826 Car05g02982 05 74737299 74742036 PCT