Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02977 ATGTCGAAGAAAAAGAATCCCCTAGTGTTTATGGACGTGTCTATTGATGGGGACCCTGTTGAAAAGATGGTGTTTGAGCTTTTCTACGATGTTGCTCCCAAGACTGCAGAAAATTTCCGTGCTTTATGTACAGGAGAGAAAGGTATCAGTCCAAATACTGGAAAATCGCTGCACTACAAGGGTTCTTTCTTCCATCAAGTTATAAAAGGCTCCATTGTGAAGGGTGGTGATTTTGTCAATCGAAATGGTACTGACGGAGAAAGCATATATGGCTCTAAGTTCCCAGATGAGTCACCTAAGCTAAAGCATGATGGCCCCGGGCTTTTGTCGATGGCGATTGCTGACCGTGACATGCTTGGTTCTCATTTTATTATCACTTTGAAAGCTGATCACCATCTTGATAGGAAACATGTAGTCTTCGGGAAGCTTGTGCAAGGGCTTCATGTATTGAAGAAAATTGAAGATGTGGGTGATGATGAAGGCCATCCAACTGTAACTGTTAAGATTATTTATTGTGGCGAATACAATGATGATGGGAAGAAGGTAAATAAATCAAAAGCAGGAAGGGATGGATCTTGCGAACCCAATAGTCATGAAACACGGAGGAAGGGAAAACCGAAAAGATCTTCAAAAGACAGAAGGAAAAGGAAAAGATATCACTCATCTGAATCGGAGAGTTCTTCTGATTCAGACACGGAATCTTCGGAAACTGATAGTGATTCTGAGTCAGATATGTCCTCATCATCTGATATAAGTTCCTCTAGTGATGACAGGCGAagaaagagaaagagatctaagaaagataaatataaacgtggaaaaaaaagagaTAAACGCCGCGACAAAAAGCGAAAAAGACGGGAGAAGAGATCAAAGCGTAGATCAAGAAGGGAGTCTGGCAGTGATTCAGATAGTGAGTGTAACCGTGGTTCTGATGTTGAAAGTCTTGATACTCAACAGAAAGAGCTGAAGCGAAAAGATCATTCTCAGAAAAAAGCTGAAGTAAACTCTCCCTCAGATGTGGAGAAAGATGCACCTACTGTCCACCATAAAAAGGAAGAGGTGGGTTTGCCGGAAAAAATTGTGAAGGAAAATGGTGAGCGGCATAGCAATGGTACTGGAGCTGTCTATAGATCTGACAGAAGTGAAGAGAGGCAACCAGACGCGATGGATGACCATTTGGGCAAATCTCGCAGGAGTCGAAGCATGAGTCCTAAGCGAGCCATGAGTAAGAGTATGAGCATCAGTCCTAGGAGGAGTGGGGACAAGAGCCTTAGCATCACTCCGAAAAGAAGATTGAGCAAAAGTCCAAGTGTTGGTAGAAGTCCTCCCCGTCCATCAAGGAGGAGTTTGAGCAGGAGTCCTGTTAGAAGGATCAGGAGTCCAAGCAGAAGCATCAGCAGGAGCCCAGTGAGGGGCAGGAAAGGGAGAAGTATCAGTAGAAGTCCTGTGATAACTCGTTCTCTTAAAAGTTTCAGCAAGAGCCCTGGAAGATCTCGTTCTCGAAGCCGCCGGAGCAGAAGTTCTCCCAGAGCGTCATCACGAAAAACAATCAGCAGAAGCCCTGTAAGAGTGTCGAGAAAGAGGGTAAGTCACAGTCCAGTTAGATCACGAAAAACAATCAGCAGAAGCCCTGTAAGAGTGTCAAGTGTAAGTCGCAGTCCAGTTAGATCACGAAAAACAATCAGCAGAAGCCCTGTAAGAATGTCAAGAAAGAGTTTAAGTCGCAGTCCAGTTAGGTCACGAAAAACAATCAGCAGAAGCCCTGTAAGATTGTCAAGAAAGAGGGTAAGTCGCAGTCCAGTTAGATCACCAGCAAGAAGCTTAAGCAGAAGCCCTGGTAGGGTCCCTTCAAAGAGAAGCATTAGCAGAAGTCCTGTTAGAGCACCCAGTAGAAGCAATCGCCGCAGTTATTCTAGGAGTCCTAGCCCTGTACGTAGAAGAAGGTCACCTCGTGGGGGTAGTTTGTCTAGGAGTGCTTCACCTGATGCTTCCCCAAAGCGTATCAGAAGGGGAAGAGGTTTCAGTGAACGATACTCCTATGCAAGAAGGTATAGAACCCCTTCTCGGTCTCCTGTGAGGTCATACCGGTACAATGGAAGAATTGATCGGGACAGATATTCAGGTTACAGAAGGTATTCCCCTAGGCGTTTCAGAAGCCCACCACCACGTGGAAGAACTCCCCCAAGGTATCGAAGGAGGAGCAGGACCCCATCTGTCTCACCCAGCCCACGCTACCGAGCTCGGCGATATAGCAGAAGCCGCAGCCCAGTTCGCAGTCGTTCCCCAGTTGAACCGCTTCGATCCCGTCCCTCTCCTCGTGTAGAAAGGCATTCATCATATTCCCGAAGCAGGAGCAGGAGTCCAGTGAAATCCAGGTCTCCTGTAGATTCACCATCTCCACGGAAAGCAAGTAGGGACAGCAGGGGGGGTTCATCATCCCGAAGCCCAGATGGAAAAAAAGGCTTGGTCTCATATGGCGATGGTTCTCCCTACTCGGGCCAAAGGTGA 2511 0.4588 MSKKKNPLVFMDVSIDGDPVEKMVFELFYDVAPKTAENFRALCTGEKGISPNTGKSLHYKGSFFHQVIKGSIVKGGDFVNRNGTDGESIYGSKFPDESPKLKHDGPGLLSMAIADRDMLGSHFIITLKADHHLDRKHVVFGKLVQGLHVLKKIEDVGDDEGHPTVTVKIIYCGEYNDDGKKVNKSKAGRDGSCEPNSHETRRKGKPKRSSKDRRKRKRYHSSESESSSDSDTESSETDSDSESDMSSSSDISSSSDDRRRKRKRSKKDKYKRGKKRDKRRDKKRKRREKRSKRRSRRESGSDSDSECNRGSDVESLDTQQKELKRKDHSQKKAEVNSPSDVEKDAPTVHHKKEEVGLPEKIVKENGERHSNGTGAVYRSDRSEERQPDAMDDHLGKSRRSRSMSPKRAMSKSMSISPRRSGDKSLSITPKRRLSKSPSVGRSPPRPSRRSLSRSPVRRIRSPSRSISRSPVRGRKGRSISRSPVITRSLKSFSKSPGRSRSRSRRSRSSPRASSRKTISRSPVRVSRKRVSHSPVRSRKTISRSPVRVSSVSRSPVRSRKTISRSPVRMSRKSLSRSPVRSRKTISRSPVRLSRKRVSRSPVRSPARSLSRSPGRVPSKRSISRSPVRAPSRSNRRSYSRSPSPVRRRRSPRGGSLSRSASPDASPKRIRRGRGFSERYSYARRYRTPSRSPVRSYRYNGRIDRDRYSGYRRYSPRRFRSPPPRGRTPPRYRRRSRTPSVSPSPRYRARRYSRSRSPVRSRSPVEPLRSRPSPRVERHSSYSRSRSRSPVKSRSPVDSPSPRKASRDSRGGSSSRSPDGKKGLVSYGDGSPYSGQR 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02977 836 MobiDBLite consensus disorder prediction 378 399 - -
Car05g02977 836 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Car05g02977 836 SUPERFAMILY Cyclophilin-like 4 178 IPR029000 -
Car05g02977 836 MobiDBLite consensus disorder prediction 697 712 - -
Car05g02977 836 Gene3D - 1 175 IPR029000 -
Car05g02977 836 MobiDBLite consensus disorder prediction 430 449 - -
Car05g02977 836 MobiDBLite consensus disorder prediction 785 812 - -
Car05g02977 836 MobiDBLite consensus disorder prediction 178 201 - -
Car05g02977 836 MobiDBLite consensus disorder prediction 497 511 - -
Car05g02977 836 MobiDBLite consensus disorder prediction 178 836 - -
Car05g02977 836 MobiDBLite consensus disorder prediction 664 684 - -
Car05g02977 836 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Car05g02977 836 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Car05g02977 836 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Car05g02977 836 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Car05g02977 836 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Car05g02977 836 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 383 - -
Car05g02977 836 MobiDBLite consensus disorder prediction 406 423 - -
Car05g02977 836 MobiDBLite consensus disorder prediction 202 217 - -
Car05g02977 836 MobiDBLite consensus disorder prediction 537 586 - -
Car05g02977 836 MobiDBLite consensus disorder prediction 614 640 - -
Car05g02977 836 MobiDBLite consensus disorder prediction 587 601 - -
Car05g02977 836 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 12 173 IPR002130 GO:0000413|GO:0003755
Car05g02977 836 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63 1 383 - -
Car05g02977 836 MobiDBLite consensus disorder prediction 481 496 - -
Car05g02977 836 MobiDBLite consensus disorder prediction 521 536 - -
Car05g02977 836 MobiDBLite consensus disorder prediction 295 367 - -
Car05g02977 836 MobiDBLite consensus disorder prediction 259 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02977 Car-Chr5 74677245 74682346 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02977 26 170 U-box Gene Family AT5G67530 40.816 9.92e-21 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02977 K09566 - jre:109001815 557.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02977 05 74677245 74682346 Car05g02977 05 74677245 74682346 ECH