Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02970 ATGGCCGTGGCAATTCAGTGTTTATCATGTGCTCGTTTCGTCACAATCGGAGGACCCCGCCGTTCCTCTCCTTTGCAACGCAAACctcttctcttctctcttactctcccctctctctctcGTAACCCCTACTCCTCAATTGCCTTCGCTTCTTCCAAAAAGAAAAACAAGAATAAATTATCTCATGTTACCGAGGGAATTGGTGAGGAAGATGAGGATGCATTTGAGTTACTCTTCAAGCAACTCGAAGAAGATCTCAAAAACGACGGTTTATCAAAAGATGATAGTGGTGATGATGAAATAACCGAAGAAGACATCGATATGCTTGAACGTGAGTTAGAAGATGTGTTGGGGGATTTTGATGCTGAATTGTTAAACACAGATATCAGCGACACACCACCGGATAATGATGATGCACAAAAAAACAGTACTGATGGAAAGGAGAGTTTACTCAACCTTAGAACTTGGCAACTGAATAAATTGGCCAGAGCCTTGAAAACTGGCCGACGCAAAACAAGTATTAAAAGTCTTGCTGCTGAGCTCTGTCTTGATAGAGGTCTTGTTCTTGATTTGCTTCGTAACCCTCCTCCAAATCTTCTGATGCTGAGCCTATCGATACCTGATGAACCTACACCATCAGCAATATTACTTGAAACTACGCCTGGAGAGACTCTTTATAAAGAAACAAGCGAAGATCATGCAGAATCTGGACCCAAGTCTAACTTACCTATTCATACCATGCAGCAGAGTTGGTCTGCTAAAAAGAAATTAAAAAAGGCTCAACTTGACACTTTGAATAGAGTTTACAGGAGATCAAAACGGCCCACTAATGCAATGATTAGCAGTATCGTGCAAGTCACGAACATTCCGCGGAGAACGGTTATTAAGTGGTTTGAAGACAAACGTATTGAAGAGGGAGTTCCAGAACAACGTGTTCCTTACGAGCGCTCTGCTCATGAAACTGGCTGA 969 0.4066 MAVAIQCLSCARFVTIGGPRRSSPLQRKPLLFSLTLPSLSRNPYSSIAFASSKKKNKNKLSHVTEGIGEEDEDAFELLFKQLEEDLKNDGLSKDDSGDDEITEEDIDMLERELEDVLGDFDAELLNTDISDTPPDNDDAQKNSTDGKESLLNLRTWQLNKLARALKTGRRKTSIKSLAAELCLDRGLVLDLLRNPPPNLLMLSLSIPDEPTPSAILLETTPGETLYKETSEDHAESGPKSNLPIHTMQQSWSAKKKLKKAQLDTLNRVYRRSKRPTNAMISSIVQVTNIPRRTVIKWFEDKRIEEGVPEQRVPYERSAHETG 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02970 322 SMART HOX_1 250 312 IPR001356 GO:0003677
Car05g02970 322 ProSiteProfiles 'Homeobox' domain profile. 248 308 IPR001356 GO:0003677
Car05g02970 322 Pfam Homeodomain 256 303 IPR001356 GO:0003677
Car05g02970 322 PANTHER ZINC-FINGERS AND HOMEOBOXES RELATED 40 317 - -
Car05g02970 322 CDD homeodomain 261 302 IPR001356 GO:0003677
Car05g02970 322 SUPERFAMILY Homeodomain-like 251 316 IPR009057 -
Car05g02970 322 MobiDBLite consensus disorder prediction 126 147 - -
Car05g02970 322 PANTHER HOMEOBOX PROTEIN 8 40 317 - -
Car05g02970 322 Gene3D - 249 310 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Car05g02970 Homeodomain 2.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02970 - - ccaj:109796293 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02970 05 74636919 74639931 Car05g02970 05 74636919 74639931 ECH