Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02959 ATGCCTCAGTTGCTACATGGGACGCTTAAGGTAATCATAAGTGAAGTTGATAGGTTGCAAACTCGATGTAATTTGGATTTCTGTCGCAAGGGCACAACACGCAAGGGGAAGAGATTTCTAGCCCAAGTCAAAGGTTGTATATTTTGTAGGCCGGAGATTGTCGGGACAAGACTCTATGCAACAGTGGATTTAGACAAAGCAAGAGTTGGAAGAACAAGAATGATAGGAAACCAACCTACAAACCCCAAATGGAATGAAACTTTTGAAATTTATTGTGCTCATTACATATCAAACATTATATTCACAATAAAAGATGATAACCCAATTGGAGCAACTCTAATTGGAAGAGCTTACATCCCTTCTGAGAAACTTCTCAAAGGACCAATAATTGACAGATGGATCGAAATATTAGATGAAGAAGATCATCGTCCTATACCAGGTGGTTCCAAAATTCGTGTCACCATGCAATTCTCAAGTGTCATTGAAGACACAAAAATAATATGGTCTAAGGGAATAAACATGCCATTTTTTGGTGTTCCTCGTACATTTTTTGATCAAAGACAAGGTTGTAGTGTTACTTTATACCAAGATGCTCATGCTTCTGATAGTAATCATACATGGATTCCAATATCAGGAACAAAATACCATGTTCCTAGAAGATGTTGGGAAGATATTTATAATTCAATTATGGATGCTAAATATTTTATTTACATAAGTGGTTGGTCTGTTCACACTGAAATAACCTTAATAAGGGATCAAAACATGTCAACAACAAAAAATGTAACACTTGGAGAATTACTTAAGACAAAAGCTAACGAAGGTGTTAATGTTCTTATGCTTGTTTGGGATGACAGAACCTCTGTTCCTGCTTTTAAGGAAGATGGTTTGATGGCAACACATGATCAAGAAACTGCTCACTACTTTAGAGGCACAAAGGTTCATTGTGTTTTGTGTCCAAGGAATCCTGATAATGGAAGAAGTATGGTTCAAGGTTTTGAAATTTCAACTATGTTCACTCATCATCAAAAGACTATTGTTGTTGATGGACATGTTAAGAAATCACTAAAGAGAAATGTTATAAGTTTCATAGGTGGAATTGATTTATGTGATGGAAGATATGATACAATGGAACATCCTTTGTTTTCAACATTGAATACAATTCATCATGATGATTTTCATCAACCAAATTTCTTAAATGCTTCTATTAAAAAAGGTGGTCCTAGAGAACCATGGCATGATATTCATTGTAAGCTAGAAGGACCTATTGCATGGGATGTTTTGTATAATTTTGAACAAAGGTGGGAAAAGCAAGTTGGTAAGCAATTTTTATTCTCAATTGAAGTGCTTGATCAAATTCTAATTCATCCTTCTGATTCGATGATATCGCAAAAAGACGACAATACTTGGAGTGTTCAATTGTTTAGGTCTATTGATGGTGGTGCTGTTGTTAATTTCCCTCAATCACCAAATGAAGTTTTTGAATTAGGCCTTGTTAGTGGAAAAGATAATGTCATTGATAGAAGTGTTCAAGATGGTTATGTAAATGCTATTAGGAGAGCCAAAAACTTCATCTACATTGAAAATCAGTATTTTATAGGTAGTAGTTCATATGGTTGGCATGGAAATGATATTAAAGTTGAAGATATTGGTGCTTTGAATCTAATACCAAAGGAACTTTCATTGAAGATTGTAAGCAAAATTGAAGCAGGAGAGAGGTTTGTAGTGTATGTGGTGATACCAATGTGGCCAGAAGGTATACCAGAAAGTGATTCAGTTCAAGCAATATTAGATTGGCAAAGAAGGACTATGGAGATGATGTATTGTGACATTGCTGATGCAATAAAAAAGAAGAAAATTGAAGCACACCCTCGTGATTATTTGAATTTTTACTGTCTTGGCAAAAGGGAGAGTAAGAAAGATGGAGAGTATGTCCCTACAGAGGAACCAGAGGCTAATAGTGACTATCATAGAGCACAAAAATCTAGGAGGTTCATGATCTATGTTCATTCAAAGATGATGATAGTGGATGATGAATACATAATCATTGGTTCAGCAAACATCAACCAAAGATCAATGGATGGTGGAAGAGACACAGAGATTGCAATGGGAGCTTTCCAACCACATCATCTAGCATCAAGTGGCCCACCAAGACCACAAGGTCAAATTTATGAGTTCAGAAGAGCATTATGGTATGAACATATTGGTGATAATAGTGTTCTATTTGATGAGCCTGAAGGTGTGGAATGTGTGAGACTTCTCAATCGTATTGGTGAAAGGAATTGGGAATTATATTCTAAGGATATATTAGATCAAAGTGTAACTACTCATCTTTTGAGATATCCTCTACATGTGGCTGAAGATGGAAGTGTAACATCACTTCCAGGGATGCAATATTTTCCTGATACCATGGCTTTCATTCTTGGTTCAAAATCTGATTTGCTTCCTCCTATACTTACCACCTAG 2463 0.3585 MPQLLHGTLKVIISEVDRLQTRCNLDFCRKGTTRKGKRFLAQVKGCIFCRPEIVGTRLYATVDLDKARVGRTRMIGNQPTNPKWNETFEIYCAHYISNIIFTIKDDNPIGATLIGRAYIPSEKLLKGPIIDRWIEILDEEDHRPIPGGSKIRVTMQFSSVIEDTKIIWSKGINMPFFGVPRTFFDQRQGCSVTLYQDAHASDSNHTWIPISGTKYHVPRRCWEDIYNSIMDAKYFIYISGWSVHTEITLIRDQNMSTTKNVTLGELLKTKANEGVNVLMLVWDDRTSVPAFKEDGLMATHDQETAHYFRGTKVHCVLCPRNPDNGRSMVQGFEISTMFTHHQKTIVVDGHVKKSLKRNVISFIGGIDLCDGRYDTMEHPLFSTLNTIHHDDFHQPNFLNASIKKGGPREPWHDIHCKLEGPIAWDVLYNFEQRWEKQVGKQFLFSIEVLDQILIHPSDSMISQKDDNTWSVQLFRSIDGGAVVNFPQSPNEVFELGLVSGKDNVIDRSVQDGYVNAIRRAKNFIYIENQYFIGSSSYGWHGNDIKVEDIGALNLIPKELSLKIVSKIEAGERFVVYVVIPMWPEGIPESDSVQAILDWQRRTMEMMYCDIADAIKKKKIEAHPRDYLNFYCLGKRESKKDGEYVPTEEPEANSDYHRAQKSRRFMIYVHSKMMIVDDEYIIIGSANINQRSMDGGRDTEIAMGAFQPHHLASSGPPRPQGQIYEFRRALWYEHIGDNSVLFDEPEGVECVRLLNRIGERNWELYSKDILDQSVTTHLLRYPLHVAEDGSVTSLPGMQYFPDTMAFILGSKSDLLPPILTT 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02959 820 Gene3D C2 domain 48 169 IPR035892 -
Car05g02959 820 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 336 372 IPR001736 GO:0003824
Car05g02959 820 Pfam Phospholipase D C terminal 740 810 IPR024632 -
Car05g02959 820 PIRSF PLD_plant 1 820 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Car05g02959 820 SMART pld_4 336 372 IPR001736 GO:0003824
Car05g02959 820 SMART pld_4 664 691 IPR001736 GO:0003824
Car05g02959 820 CDD C2_plant_PLD 1 157 - -
Car05g02959 820 PANTHER PHOSPHOLIPASE D ALPHA 3 3 820 - -
Car05g02959 820 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 55 158 IPR035892 -
Car05g02959 820 SUPERFAMILY Phospholipase D/nuclease 509 735 - -
Car05g02959 820 PANTHER PHOSPHOLIPASE D 3 820 IPR015679 -
Car05g02959 820 SUPERFAMILY Phospholipase D/nuclease 179 441 - -
Car05g02959 820 ProSiteProfiles C2 domain profile. 1 134 IPR000008 -
Car05g02959 820 Gene3D Endonuclease Chain A 202 451 - -
Car05g02959 820 Gene3D Endonuclease Chain A 464 709 - -
Car05g02959 820 SMART C2_3c 8 133 IPR000008 -
Car05g02959 820 Pfam Phospholipase D Active site motif 336 372 IPR001736 GO:0003824
Car05g02959 820 Pfam Phospholipase D Active site motif 665 691 IPR001736 GO:0003824
Car05g02959 820 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 664 691 IPR001736 GO:0003824
Car05g02959 820 Pfam C2 domain 46 136 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02959 Car-Chr5 74533656 74539812 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02959 3 820 Phospholipase D Gene Family (Wang group) AT3G15730 61.232 0.0 1033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02959 K01115 - gmx:100794115 1218.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02959 05 74533656 74539812 Car05g02959 05 74533656 74539812 ECH