Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02958 ATGTTGCACTTACTGCACGGGAGGCTTGATGTGACTATATATGAGGTCGATATACTACAAACTCCTCTTACTGGATGCGCCAATTTTGATCTCTGCAACAAGGGAACATGTACAAGCGTGGGGAAGAAAATTGTATCCCAACTCAAGAGTTTTTTGTTGTGTCAATGCCAAAGCCAATGCCAACCTGAGCTTGTAGGGAAGGGTCTCTATGCAACAGTTGATCTAGACAAAGCAAGGGTTGGAAGAACTAGAATGTTAAATGATCAACCTTTCAACCCAAAATGGAATGAGAAATTTCACATTTACTCTGCTCATTCAATCTCCAATATTGTGTTCACTGTCAAACAAGATAACCCAATTGGTGCAACTCTAATTGGAAGAGCTTATGTTCCTGTTGAACAAGTTATAAAAGTCAACACATTGAACACATGGGCTCAAATACTAGATGAGAATCATCGTCCAATACAAGGTGGTTCCAAAATCCATGTTCAAATGCAATTCTTAAGTGTCAAAAATGATCCAAATTGGTCTCAAGGTATAAAGAGTTTAGGATTTCAAGGAGTTCCTCACACTTTCTTCAAACAAAATACTAATTGTCAAGTTACTCTATACCAAGATGCACACGTTCAAGATGGTTCTGTTCCATCTATTCAATTGGATGGAGCAGAACATTATGAGCCTAGAAAATGTTGGGAAGATATTTACAATGCTATTATGGATGCTAAACATTTTATTTGCATAACTGGTTGGTCTGTTGACACTGAAATAACCTTAATAAGGGACCCAAATAAGTCAACAAAAACTAGTGCAACACTTGGAGAATTGCTTAAGGCAAAAGCTAATGAAGGTGTTAATGTTCTTATGCTTGTTTGGGATGACAGAACTTCAGTTCCTGATTTAAAGAAAGATGGCTTGATGGCAACTCGTGATCAAGAAACTGGTGAGTACTTTAAAAACACAAATGTGCATTGTGTTTTGTGTCCGCGTAATCCCGGCGCTGGAAGAAGCATAGTTCAAGGTTTTGAAGTTTCAACAATGTTCACTCATCACCAAAAGACTATAATTCTTGACAGTAAAATTGTTGGTTCTACACAATTGAAGAAAAGAACTATCACAAGTTTTGTTGGTGGGATTGATCTTTGTGATGGAAGATATGATACAATGGAACATCCTTTGTTTTCAACATTGGGTACAATCCATCATGATGATTTTCATCAACCAAATTTCCCAAGTGCTTCTATTAAAAAAGGTGGTCCTAGAGAACCATGGCATGATATTCATTGTAAGCTAGAAGGGCCTATTGCATGGGATGTTTTGTGCAATTTTGAGCAAAGATGGGAGAAACAAGTTGGGAAGCAATTTCCACTTCCTTCAAATATGATTGAAGAATATAATCTTGATCGTGTATCGAATGTCGAAGCAATGAATGGAAACAGCTCATGGAATGTTCAGTTGTTTAGGTCCATTGATGGTGGTGCTGCTTTTGGCTTCCCTCAAGATCCAAGAGAAGCTGCTGAAAAAGGTCTTGTTAGTGGAAAAGATAACATCATTGATAGAAGTATTCAAGATGGTTATATAAACGCTATTCGTCGAGCGAAAAACTTCATCTACATTGAAAACCAGTACTTCCTAGGTAGTTCATATGGTTGGCAAGCAAATAATATCAAAGTTGAAGACATTGGTGCTTTGCATCTTATACCAAAGGAACTGTCATTGAAGATTGTTAGCAAAATTGAAGCAGGAGAGAGATTTTCTGTGTACATTGTGATTCCAATGTGGCCAGAAGGTATACCTGAAAGTGCTTCAGTTCAAGCAATATTGGATTGGCAAAGAAGGACTATGGAGATGATGTATTCTGATATAGCTGAAGCCCTTAGAAGAAAAGGGATCAGAGCCAACCCAAGAGATTACTTGACATTTTTTTGCCTTGGAAATAGAGAAGGTAAGAAAGATAATGAATATACTCCTACAGAAGCACCAGAACCTGGTACTGATTATAGTAGAGCACAAAATTCAAGGAGATTCATGATATATGTTCATGCCAAAATGATGATAGTTGATGATGAATACATAATAATTGGTTCAGCCAACATAAACCAAAGATCAATGGATGGTGCTAGGGACACTGAAATTGCAATAGGTGCATTTCAACCACAACATATATCATCATACAATAAGCCACCAAAAGGACAAATATATGGATTTAGACGTGCACTATGGTATGAGCACCTTGGTGATCTTGGTGATACAAGCTGCTTTGATAATCCAGAAAGTTTAAAATGCATAAAGCTAGTGAACCGTCTTGCTGACACCAATTGGGACATATACTCAGATGATACATTTGATGAATACATACCATTTCAACATTTAATGAGATATCCAATACGAGTTGCTAACAATGGAGACATAACAACCCTTCCAGGATTTGTATATTTTCCTGATACTAAGGCTAGGATTCTTGGTTCCAAAACTGAATACCTTCCTCCAATTCTCACTACCTAG 2502 0.3733 MLHLLHGRLDVTIYEVDILQTPLTGCANFDLCNKGTCTSVGKKIVSQLKSFLLCQCQSQCQPELVGKGLYATVDLDKARVGRTRMLNDQPFNPKWNEKFHIYSAHSISNIVFTVKQDNPIGATLIGRAYVPVEQVIKVNTLNTWAQILDENHRPIQGGSKIHVQMQFLSVKNDPNWSQGIKSLGFQGVPHTFFKQNTNCQVTLYQDAHVQDGSVPSIQLDGAEHYEPRKCWEDIYNAIMDAKHFICITGWSVDTEITLIRDPNKSTKTSATLGELLKAKANEGVNVLMLVWDDRTSVPDLKKDGLMATRDQETGEYFKNTNVHCVLCPRNPGAGRSIVQGFEVSTMFTHHQKTIILDSKIVGSTQLKKRTITSFVGGIDLCDGRYDTMEHPLFSTLGTIHHDDFHQPNFPSASIKKGGPREPWHDIHCKLEGPIAWDVLCNFEQRWEKQVGKQFPLPSNMIEEYNLDRVSNVEAMNGNSSWNVQLFRSIDGGAAFGFPQDPREAAEKGLVSGKDNIIDRSIQDGYINAIRRAKNFIYIENQYFLGSSYGWQANNIKVEDIGALHLIPKELSLKIVSKIEAGERFSVYIVIPMWPEGIPESASVQAILDWQRRTMEMMYSDIAEALRRKGIRANPRDYLTFFCLGNREGKKDNEYTPTEAPEPGTDYSRAQNSRRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDTEIAIGAFQPQHISSYNKPPKGQIYGFRRALWYEHLGDLGDTSCFDNPESLKCIKLVNRLADTNWDIYSDDTFDEYIPFQHLMRYPIRVANNGDITTLPGFVYFPDTKARILGSKTEYLPPILTT 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02958 833 CDD PLDc_pPLD_like_1 225 398 - -
Car05g02958 833 Pfam Phospholipase D Active site motif 345 384 IPR001736 GO:0003824
Car05g02958 833 Pfam Phospholipase D Active site motif 676 702 IPR001736 GO:0003824
Car05g02958 833 ProSiteProfiles C2 domain profile. 1 145 IPR000008 -
Car05g02958 833 SMART C2_3c 8 144 IPR000008 -
Car05g02958 833 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 69 169 IPR035892 -
Car05g02958 833 Gene3D C2 domain 67 169 IPR035892 -
Car05g02958 833 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 345 384 IPR001736 GO:0003824
Car05g02958 833 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 675 702 IPR001736 GO:0003824
Car05g02958 833 PANTHER PHOSPHOLIPASE D 2 833 IPR015679 -
Car05g02958 833 SMART pld_4 345 384 IPR001736 GO:0003824
Car05g02958 833 SMART pld_4 675 702 IPR001736 GO:0003824
Car05g02958 833 Pfam Phospholipase D C terminal 751 823 IPR024632 -
Car05g02958 833 PANTHER PHOSPHOLIPASE D ALPHA 3 2 833 - -
Car05g02958 833 SUPERFAMILY Phospholipase D/nuclease 509 745 - -
Car05g02958 833 CDD C2_plant_PLD 4 168 - -
Car05g02958 833 Gene3D Endonuclease Chain A 216 475 - -
Car05g02958 833 Pfam C2 domain 69 146 IPR000008 -
Car05g02958 833 SUPERFAMILY Phospholipase D/nuclease 173 457 - -
Car05g02958 833 PIRSF PLD_plant 1 833 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Car05g02958 833 Gene3D Endonuclease Chain A 496 727 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02958 Car-Chr5 74527900 74531722 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02958 3 833 Phospholipase D Gene Family (Wang group) AT3G15730 62.455 0.0 1071
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02958 K01115 - gmx:100791688 1286.94