Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02954 ATGATGTGTTCAAGTGTGAGTAAGCATGTTGTGCAGTGCTCAATCGGTACCGCATCAGGTGTGAAATCACAAGCGTGCTCTTTTCGCAGCGATGAGCATGGTTCTTCATCGGTTCCAAGTAGCAGTAGGAGAGGTGTATTATGCATAGCCACGTTGCCATGCCTTCTTCCCCTCACTCACATCTTTGCTTCTCTCCCAGCCAACGCTATATCAGTCACACCAGCTACAAATGAATATCTTCGAATTAAACAAGAGGTGAGGAAGGTATTGTCAAAGGGAAAGGCTGCGGGTGTGCTTCGTTTGGTTTTCCATGATGCTGGAACCTTTCAAATTGATGATACTACAGGTGGCATGAATGGTTCTATAGTCTATGAACTTGAAAGACCTGAAAATGCTGGTCTCAAAAAATCAGTAAAGGTTCTGCAGAAAGCGAAGACCCAGATAGATGCTATCCACCCAGTATCCTGGGCGGACATTATTTCTGTGGCCGGAGCTGAAGCAGTTGAAGTATGTGGAGGTCCTGCTATCCAAGTCAGACTCGGCAGACAAGATTCACTGGGGCCTGATTCTGAAGGAAAACTTCCTGAGGAAACACTCGATGCTTCTGGTTTGAAGAAATGCTTCCAGAAAAAAGGCTTCTCAACACAAGAACTGGTAGCTTTGTCTGGAGCCCACACTCTTGGAAGTAAAGGTTTCGGAAGCCCTACTTCGTTCGACAATTCATATTACAAGGTTCTTTTGGAGAAGCCTTGGATATCTTCTGGTGGTATGCCAAGTATGATTGGTCTTCCTTCAGATCATGCACTTGTTGAGGATGATGAATGCTTAAGATGGATTAAAAATTACGCAGACAATGAGAATATGTTCTTTGAAGATTTTAGAAATGCGTATGTCAAGCTAGTGAATTCTGGTGTGAGATGGAATAGCTTATAA 933 0.4373 MMCSSVSKHVVQCSIGTASGVKSQACSFRSDEHGSSSVPSSSRRGVLCIATLPCLLPLTHIFASLPANAISVTPATNEYLRIKQEVRKVLSKGKAAGVLRLVFHDAGTFQIDDTTGGMNGSIVYELERPENAGLKKSVKVLQKAKTQIDAIHPVSWADIISVAGAEAVEVCGGPAIQVRLGRQDSLGPDSEGKLPEETLDASGLKKCFQKKGFSTQELVALSGAHTLGSKGFGSPTSFDNSYYKVLLEKPWISSGGMPSMIGLPSDHALVEDDECLRWIKNYADNENMFFEDFRNAYVKLVNSGVRWNSL 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02954 310 PRINTS Haem peroxidase superfamily signature 95 109 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car05g02954 310 PRINTS Haem peroxidase superfamily signature 154 171 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car05g02954 310 PRINTS Haem peroxidase superfamily signature 172 184 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car05g02954 310 PRINTS Haem peroxidase superfamily signature 217 232 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car05g02954 310 ProSitePatterns Peroxidases proximal heme-ligand signature. 217 227 IPR019793 -
Car05g02954 310 Gene3D Peroxidase, domain 2 195 297 - -
Car05g02954 310 SUPERFAMILY Heme-dependent peroxidases 84 309 IPR010255 GO:0004601|GO:0006979|GO:0020037
Car05g02954 310 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 32 307 IPR044831 GO:0004601|GO:0034599
Car05g02954 310 Gene3D - 83 304 - -
Car05g02954 310 ProSiteProfiles Plant heme peroxidase family profile. 57 310 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car05g02954 310 PANTHER L-ASCORBATE PEROXIDASE 6-RELATED 32 307 - -
Car05g02954 310 ProSitePatterns Peroxidases active site signature. 95 106 IPR019794 GO:0004601
Car05g02954 310 PRINTS Plant ascorbate peroxidase signature 95 110 IPR002207 GO:0004601|GO:0006979|GO:0020037
Car05g02954 310 PRINTS Plant ascorbate peroxidase signature 113 123 IPR002207 GO:0004601|GO:0006979|GO:0020037
Car05g02954 310 PRINTS Plant ascorbate peroxidase signature 153 171 IPR002207 GO:0004601|GO:0006979|GO:0020037
Car05g02954 310 PRINTS Plant ascorbate peroxidase signature 172 184 IPR002207 GO:0004601|GO:0006979|GO:0020037
Car05g02954 310 PRINTS Plant ascorbate peroxidase signature 193 210 IPR002207 GO:0004601|GO:0006979|GO:0020037
Car05g02954 310 PRINTS Plant ascorbate peroxidase signature 211 232 IPR002207 GO:0004601|GO:0006979|GO:0020037
Car05g02954 310 PRINTS Plant ascorbate peroxidase signature 281 305 IPR002207 GO:0004601|GO:0006979|GO:0020037
Car05g02954 310 Pfam Peroxidase 83 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02954 Car-Chr5 74493880 74497669 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02954 95 308 Peroxidase AT4G16270 31.295 1.33e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02954 K00434 - gmx:100792735 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02954 05 74493880 74497669 Car05g02954 05 74493880 74497669 ECH