Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02927 ATGAAGCTTCATTTTCTTATGCCTCACATGGTGCTTCTTATTATTATTATTCATGAACTCTTTTGTATTCATATCTCAGCAGAGACTCTTGTTTCTTCACCTCAATTCTCACCTATTACTCCACTTTCTTCCTCTATGCCTAGGCAAGTGGAAGAAGAGAATCACCAAAAAGATTATTCACACAAGAAAGTTTTACTAGTTCTTGTTATTATCGCCATTGCACTTAGTGTACTCATTTTGAGTATCTTATGTTTATGGATTTATCACATCAAGCATCCATCAAAATCCAAAAGAAAAAATGTTCTAAATTCAGATGCAGAGAAAGGGAACCCACCAGCACAATTTTTGAGTAAATTCAGTTCCATTGAGTTGGTTGGTTTGAAGAAAGGGTGTATTCCAATAATTGATTACAAGAAAATAGAAAAATCAACCAATAATTTTCAAGAAAATAACATCTTGGGTATAGGTGGTTTTGGATGTGTTTACAAGGCACACTTTGATGAAAATTTTGATGTTGCTGTTAAGAAACTACACTGCCATACTCAAAATGCTTTGAGAGAATTTGAGAATGAGGTTGATTTGTTAAGTAAAGTTCAGCATCCAAATATAATTTCTTTACTGGGTTGTAGCAATGATGGAGACATGAAATTTATTGTGTATGAGTTAATGGAAAATGGATCCTTGGAAGCTCAATTACATGGACCATCACGTGGCTCAGGATTGACTTGGCACGCGAGACTGAAGATTGCTCTTGACACAGCAAGAGCATTAGAATATCTACATGAGCATTGTTACCCTTCAGTGATTCATAGAGATATGAAATCTTCCAATATTCTTTTAGATGAAAACTTCAATGCCAAGCTATCTGATTTTGGTCTAGCCATAATTGATGGGTCCCAAAAGAAGAAGAACATCAAGCTTTCAGGAACATTGGGTTATGTAGCACCAGAATATCTTCTAGATGGTAAATTGAGTGATAAAAGTGACGTGTATGCTTACGGAGTTGTACTCTTGGAGCTTCTGTTGGGAAGGAAGCCTGTGGAAAAACTATCAGCTGCTCAGTGTCAATCACTTGTTACATGGGCCATGCCGCAGCTCACAGATAGGTCCAAACTTCAAAACATTGTGGATCCAGTGATAAAGAATTCAATGGATCTCAAGCACTTGTACCAGGTTGCTGCAGTGGCTGTACTATGCGTGCAACCAGAGCCAAGTTACCGCCCGCTAATCACTGATGTTCTTCACTCACTAATCCCTCTTGTTCCAGTAGAACTTGGGGGAACACTCAGAGTGTAA 1296 0.3781 MKLHFLMPHMVLLIIIIHELFCIHISAETLVSSPQFSPITPLSSSMPRQVEEENHQKDYSHKKVLLVLVIIAIALSVLILSILCLWIYHIKHPSKSKRKNVLNSDAEKGNPPAQFLSKFSSIELVGLKKGCIPIIDYKKIEKSTNNFQENNILGIGGFGCVYKAHFDENFDVAVKKLHCHTQNALREFENEVDLLSKVQHPNIISLLGCSNDGDMKFIVYELMENGSLEAQLHGPSRGSGLTWHARLKIALDTARALEYLHEHCYPSVIHRDMKSSNILLDENFNAKLSDFGLAIIDGSQKKKNIKLSGTLGYVAPEYLLDGKLSDKSDVYAYGVVLLELLLGRKPVEKLSAAQCQSLVTWAMPQLTDRSKLQNIVDPVIKNSMDLKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLIPLVPVELGGTLRV 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02927 431 PANTHER BNAA04G14780D PROTEIN 26 431 - -
Car05g02927 431 Pfam Protein kinase domain 147 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02927 431 ProSitePatterns Protein kinases ATP-binding region signature. 153 176 IPR017441 GO:0005524
Car05g02927 431 ProSiteProfiles Protein kinase domain profile. 147 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02927 431 Gene3D Phosphorylase Kinase; domain 1 114 222 - -
Car05g02927 431 Gene3D Transferase(Phosphotransferase) domain 1 223 422 - -
Car05g02927 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 268 280 IPR008271 GO:0004672|GO:0006468
Car05g02927 431 PANTHER OS01G0750732 PROTEIN 26 431 - -
Car05g02927 431 SMART serkin_6 147 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02927 431 SUPERFAMILY Protein kinase-like (PK-like) 128 417 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02927 Car-Chr5 74262624 74266389 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02927 52 421 Receptor kinase-like Gene Family AT3G58690 43.122 2.85e-95 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Car05g02927 Pkinase 2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02927 - - gmx:100812044 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03210 04 60468138 60472875 Car05g02927 05 74262624 74266389 PCT