Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02923 ATGGATGATCCAAGTGACCGGTTTCCCATCGGAATGCGTGTTCTTGCCGTCGACGACGACCCTACCTGCCTCTTTGTTTTGGAAACTCTCCTCCGGAGATGTCAATACCACGTAACCACAACTAGTCAAGCAATAAAGGCATTGGCTATGTTGAGAGAAAACAAAGACAAATTTGACCTTGTAATCAGTGATGTGCACATGCCAGACATGGATGGATTTAAGCTGCTTGAACTTGTCGGACTTGAAATGGACCTTCCTGTCATAATGTTGTCTGCATACGGTGATACGAAGCTGGTGATGAAGGGAATTTCCCATGGAGCATGTGATTATTTACTGAAACCTGTGAGAATCGAGGAGCTAAAGAACATTTGGCAGCATGTAATTAGGAGGAAGAAATCTGATCCAAAGGAGAAAAACAAAACCAGCAACCGAGACAAAACTACTTCCGATAGTGGCGaagaaaatggaaagctgaataagaaaaggaaggatcaggatgaagatgaagacgaggataaagagaacgatCATGACAACGAAGACCCTTCAGCCCAGAAGAAGCCCCGGGTTGTTTGGTCTGTGGAGCTGCACCGCAAGTTCGTTGATGCTGTTAATCGGCTAGGCATTGACAAGGCTGTACCCAAAAAAATTCTTGATATGATGAATGTCGAAAATATTACAAGGGAGAACAAGTATAGACTTTATCTGAAAAGAATTAGCTGCGTGGCGAACCAACAAGCTAGTATGGTGGCAGCCTTTGGAAGTGCAGATCAATCCTATTTGAGAATGGCTGGTTCTGGACATTTTCACAACAATGCTTTCAGATCCTTTTCATCTAGTGGCTTTATTAGTAGTCTGAACACTCCAGCTGGTCTGAATGGGCACGGATTTCCTCCTTCCGGAATACTTCAGTTGGGCCAATCACAAAATTTAAACAATTCTTCCAACGATCAACTTAAATTCCAGTCAGCCATAACTCCTGTTAATCAAAATGTTCTTCATGGAACGCCAATGTCCATAGGGTTTGATCACTCGCAAAACAGCAAGGGTGTTCTTTCTGTTCAAAATCTGACTACTGATGATGTCAAAACAACTTTTCCCATCCCAGATCAAAGACTGAGATTGGCCACCTCTAGTTCTTATCCACCTAGCCTCGGTATCACAAACAATGCTTCTAGTTCTTCGGGAGCCTCTCGACATTCTGAATTTCCTTTCTCTATGATAGATCAAAGCAGGCATAGTGATAATTGGTCAAGTGCTGTGCAGTTATCTGGGATCCAGACAAATTCTTTCCCTTCAAGCGAGTGTTTTCGACAGACAGCTATTCCTCCTTCGGATAACATGGCTTCTTTGCCTTTGCAAGGGGCGTATCTCAGTGGTCAATCCATCGCTTCACTATGCAGTCAATCTCATGGTTCATTGGCAGATATGCACTCCCAAGGAGCGTTTTTTACTAATCCACCTGAGTATGGAAACAGTAATTTACCCTTTCAAGGATGGGAAGACCATAATCAGGATGCTATTTACCACTCAAACGTTACCTGTGGATCAACAAACTCTCCATTTAGCGGGGCTGTTGTTCCGTCGGGCCTAACCACAACTAACTCAGCCTTGCACAGAAACTTGGACACTAGATTTTGTGATGATCCCATACAAATGAAGCATGCTGGATTCGGGGAATTAGTGGAATGCAGCTCATCAAGACAGCCTAGAGCGAATGTCGTAAGCCAGCAGAAGTTCTCTAATAATCTTGGTTCACTTGAATACTTGGTGAGTTCAACGATGGAACAGGAGCAAGATAAGATGAAATTATTGAATGGAGACCTTATTTGCGATAATTACTCTTTGTGA 1851 0.4165 MDDPSDRFPIGMRVLAVDDDPTCLFVLETLLRRCQYHVTTTSQAIKALAMLRENKDKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSAYGDTKLVMKGISHGACDYLLKPVRIEELKNIWQHVIRRKKSDPKEKNKTSNRDKTTSDSGEENGKLNKKRKDQDEDEDEDKENDHDNEDPSAQKKPRVVWSVELHRKFVDAVNRLGIDKAVPKKILDMMNVENITRENKYRLYLKRISCVANQQASMVAAFGSADQSYLRMAGSGHFHNNAFRSFSSSGFISSLNTPAGLNGHGFPPSGILQLGQSQNLNNSSNDQLKFQSAITPVNQNVLHGTPMSIGFDHSQNSKGVLSVQNLTTDDVKTTFPIPDQRLRLATSSSYPPSLGITNNASSSSGASRHSEFPFSMIDQSRHSDNWSSAVQLSGIQTNSFPSSECFRQTAIPPSDNMASLPLQGAYLSGQSIASLCSQSHGSLADMHSQGAFFTNPPEYGNSNLPFQGWEDHNQDAIYHSNVTCGSTNSPFSGAVVPSGLTTTNSALHRNLDTRFCDDPIQMKHAGFGELVECSSSRQPRANVVSQQKFSNNLGSLEYLVSSTMEQEQDKMKLLNGDLICDNYSL 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02923 616 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR10 5 594 - -
Car05g02923 616 PIRSF RR_ARR_type-B 1 616 IPR017053 GO:0003677|GO:0003700|GO:0009736
Car05g02923 616 ProSiteProfiles Response regulatory domain profile. 13 128 IPR001789 GO:0000160
Car05g02923 616 MobiDBLite consensus disorder prediction 131 189 - -
Car05g02923 616 SUPERFAMILY CheY-like 11 135 IPR011006 -
Car05g02923 616 Pfam Response regulator receiver domain 14 122 IPR001789 GO:0000160
Car05g02923 616 SMART REC_2 12 124 IPR001789 GO:0000160
Car05g02923 616 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 187 230 IPR006447 GO:0003677
Car05g02923 616 Gene3D - 183 240 - -
Car05g02923 616 SUPERFAMILY Homeodomain-like 185 238 IPR009057 -
Car05g02923 616 CDD REC_typeB_ARR-like 14 128 - -
Car05g02923 616 Gene3D - 11 149 - -
Car05g02923 616 PANTHER TWO-COMPONENT RESPONSE REGULATOR 5 594 IPR045279 GO:0009736
Car05g02923 616 MobiDBLite consensus disorder prediction 131 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02923 Car-Chr5 74199270 74203406 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02923 6 615 Response Regulator Gene Family AT2G25180 40.426 4.55e-119 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Car05g02923 Response_reg 2.1e-23 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02923 - K14491 gmx:100809002 793.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03217 04 60554252 60558870 Car05g02923 05 74199270 74203406 PCT