Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02919 ATGGCCAAGTGTCACCGGAGCAACGTTAATTCACTAGTTCTCGATCAACAACACCCTGCCAAGAATACCACCGCCGGCAACCTACGACTATCCGCCTCCTCGTTCCGCCGCATTATTTTCGACGCCGTAAGCTGCGGCGGCACTTCTCGGCACCGACAATGCCACCGCGACGAAGACGAAAACGACGTTAGCTCCACCGCCTCGAAGGCAAGCTTGGCACCCGATTGCCACAAAGAAAAGCGGCAAGTGCGAGAAGAGAAGTCAGAGAAGAGGCTAACGAATCTTCTGAACGTAGCGGTAAATGAAACGGAGACGGAGTCAAAGAAGAAGGAAGAGACATCGACGGAGCTGAAGCAAGTAGTAATGGAGTTGCGCGGAGATGACTCGACGAAACGGCGAATGGCGGCGGCGAGAGTAAGGTCACTGACGAAAGAAAATTCCGATGCGAGAAGCACACTCGCAATTCTCGGAGCAATTCCTCCACTCGTTGGAATGCTCGATTCAGAAGAATTTCATTCTCAGATCGATTCGCTTTACGCGTTACTCAATCTCGGAATCGGAAACGAAGCAAATAAAGCAGCGATTGTGAAAGTTGGTGCTGTTCACAAGATGGTGAAGCTCATTGAATCACCGTGTGTTGTTGCAGATTCATTTGTATCTGAAGCAATTGTTGCGAATTTCCTTGGATTGAGTGCTTTGGATTCTAACAAATCAATAGTTGGATCCTCTGGTGCAATACCTTTCCTAATTAGAACCCTAAAAAATTTAGATAATAGTAGCAAAAGTAGTTTCCAAGTTAAACAAGATGCTCTCAAGGCTCTGTACAATCTTTCAATCAATCATACCAACATTTCATTCATTTTGGAAACCGATTTGGTCTTGTTTCTGATAAACTCAATAGGAGATATGGAAGTGAGTGAGAGAATCCTTTCAATTTTGAGCAATTTGGTGTCAACTCCAGAAGGCAGAAAAGCTATTAGTGCTGTTAGGGGTTCAATCATTGTTTTGATTGATGTATTGAATTGGACAGATTCACCTGAATGCCAAGAGAGGGTTTCATACATTTTGATGATTATGGCACACAAAGCTTATGCTGATAGGCAAGCCATGATCGAGGCAGGGATAGTATCGTCATTGCTTGAATTGACGCTTTTGGGTACTGCCTTGGCGCAGAAAAGGGCATCAAGGATATTGGAATGTTTAAGGATAGACAAAGGGAAACAGGTTTCTGGGAGCTGTGGTGGTGGTGGAAACTTAGGTTCAACTGTGTCTGCACCTATTTGTGGTGCCTCTTCATCTTCTTTCGTGAAGATGGATGGAGGCGGTAAAGAGTATTTAATGGACGAACTGAACATGATGAGTGAGGAAAAGAAAGCAGTTAACCAATTAGTCCAGCAGAGTTTGCAGAACAACATGATGAAAATTGTCAAGAGGGCTAATTTGCGTCAAGATTTCGTTCATTGGGAGCGTTTTGCTTCGCTCACTTCAAGTTCGACATCAAAGAGCCTGCCATTTTGA 1518 0.4453 MAKCHRSNVNSLVLDQQHPAKNTTAGNLRLSASSFRRIIFDAVSCGGTSRHRQCHRDEDENDVSSTASKASLAPDCHKEKRQVREEKSEKRLTNLLNVAVNETETESKKKEETSTELKQVVMELRGDDSTKRRMAAARVRSLTKENSDARSTLAILGAIPPLVGMLDSEEFHSQIDSLYALLNLGIGNEANKAAIVKVGAVHKMVKLIESPCVVADSFVSEAIVANFLGLSALDSNKSIVGSSGAIPFLIRTLKNLDNSSKSSFQVKQDALKALYNLSINHTNISFILETDLVLFLINSIGDMEVSERILSILSNLVSTPEGRKAISAVRGSIIVLIDVLNWTDSPECQERVSYILMIMAHKAYADRQAMIEAGIVSSLLELTLLGTALAQKRASRILECLRIDKGKQVSGSCGGGGNLGSTVSAPICGASSSSFVKMDGGGKEYLMDELNMMSEEKKAVNQLVQQSLQNNMMKIVKRANLRQDFVHWERFASLTSSSTSKSLPF 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02919 505 SMART arm_5 188 232 IPR000225 GO:0005515
Car05g02919 505 SMART arm_5 146 186 IPR000225 GO:0005515
Car05g02919 505 SMART arm_5 233 279 IPR000225 GO:0005515
Car05g02919 505 SMART arm_5 280 318 IPR000225 GO:0005515
Car05g02919 505 MobiDBLite consensus disorder prediction 49 88 - -
Car05g02919 505 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 1 505 - -
Car05g02919 505 Gene3D - 72 260 IPR011989 -
Car05g02919 505 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 505 - -
Car05g02919 505 SUPERFAMILY ARM repeat 116 388 IPR016024 -
Car05g02919 505 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 244 283 IPR000225 GO:0005515
Car05g02919 505 Gene3D - 261 411 IPR011989 -
Car05g02919 505 MobiDBLite consensus disorder prediction 73 88 - -
Car05g02919 505 MobiDBLite consensus disorder prediction 50 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02919 Car-Chr5 74143381 74145491 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02919 78 416 U-box Gene Family AT2G23140 30.000 4.19e-30 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02919 - - gmx:100796229 565.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03219 04 60586672 60589382 Car05g02919 05 74143381 74145491 PCT