Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02912 ATGGAACCAACGTGTGTGGATACTTCTCTCAATCTCAACGTTATTCCTTCTCGAGACACAGAAGTTACCGCGGAGAAAGTTTTGGTCGAAGAGTTGGAGCGTCTAAATCATGAAAATAAAATATTAACGGAGAGCTTGAACCACATGTGCAATAACTATGTTGTTTTGCAAAAGCATTTGAGTCGATTTAACCAACCGAGTGATACAAATTTTGAAAATGAAATAGTGACACAGTCACGGAAGAGAAAAGCGGGGAGCATTGAAAATTGTGTCAATCAATTTGGTACTAATAGTATTGTTGAGTGTAGCACCACTACTACTGAGGAGACATTCAAAAGAACCACACATAATTCATCGCCAAAAATTTCCAAGGTTCTTGTATGGACAGATGCATCCAATACTGGCTTATATGTGAGGGATGGATATCAATGGAGGAAATACGGTCAGAAAGTTACTAGAGACAACCCATCTCCTAGGGCTTACTTCAAGTGCTCCTTTGCCCCAAGCTGCCCAGTGAAGAAGAAGGTGCAAAGAAGTGTAGAAGACCCATCAATTTTAGTGACAACATATGAAGGAGAGCACAACCATGGGCAACAACAAACAGAAATATCACTAACTAGTTCAAACCAAAGTGAAAGTACCCCTACATATAGTAATTTAGTTCCTTCATCTTCAGTACACTCAATTAGGAATAATGATTTGGGTACACCTCCAGTTTCAACGCTTGACTTGGTCAACTATACCGAAAACCAAAAGTCTTCTATCCAACAGTTTTTAGTTCAGCAAATGGCCACTTCTTTGACAAATGATCCTAATTTCACAGCTGCACTTGTCACCGCCATTTCAGGAAGATTTATGGATCGCACATCACAGGAAAAACGTTGA 885 0.3966 MEPTCVDTSLNLNVIPSRDTEVTAEKVLVEELERLNHENKILTESLNHMCNNYVVLQKHLSRFNQPSDTNFENEIVTQSRKRKAGSIENCVNQFGTNSIVECSTTTTEETFKRTTHNSSPKISKVLVWTDASNTGLYVRDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDPSILVTTYEGEHNHGQQQTEISLTSSNQSESTPTYSNLVPSSSVHSIRNNDLGTPPVSTLDLVNYTENQKSSIQQFLVQQMATSLTNDPNFTAALVTAISGRFMDRTSQEKR 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02912 294 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 287 - -
Car05g02912 294 SUPERFAMILY WRKY DNA-binding domain 137 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car05g02912 294 Pfam WRKY DNA -binding domain 140 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car05g02912 294 ProSiteProfiles WRKY domain profile. 140 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car05g02912 294 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 287 IPR044810 GO:0003700
Car05g02912 294 MobiDBLite consensus disorder prediction 193 237 - -
Car05g02912 294 Gene3D WRKY domain 122 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car05g02912 294 SMART WRKY_cls 138 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car05g02912 294 Coils Coil 25 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02912 Car-Chr5 74061696 74064592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02912 6 293 WRKY Transcription Factor Family AT1G80840 45.066 1.39e-70 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car05g02912 WRKY 6.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02912 - - gmx:100127373 353.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g03241 04 60769994 60771756 Car05g02912 05 74061696 74064592 PCT