Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02899 ATGCTACAAGGGAATAATACAGAACAAAGTGATCCAGGAAACAGGTCTGTTGGAGGATTTTCTGTTATAGAATCAGCAAAAAGAGTTCTTGAGATGTTCTGCCCTGGAACTGTTTCTTGTGCAGACATAATTGCTCTAGCAGCTAGAGATGCAGTTGAAATTGCTGGTGGACCAAGGATTCAGATTCCTACAGGTAGGAGAGATGGGATGGTTTCAATTGCTTCAAATGTCAGACCAAACATTGTGGACACTAGTTTTACTATGGATGAGATGGTTAAGCTTTTTTCCACTAAAGGGTTGTCCTTGCTTGATCTTGTTGTCCTTTCAGGAGCTCATACAATAGGATCAGCACATTGCCACACATTCAGGGATCGTTTCCAACAAGACTCAAAGGGAAATCTTAAGCTCATTGACCAAACCATTGATAGTAGCTATGCAGATGAGCTAATAAAACAGTGTCCAATAAATGCACAACCGTCTATGACAGTAAACAATGATCCTGCAACATCTATGCTATTTGACAACCAATACTTCAGAAATCTTCTGGCTCACAAAGTTCTGTTCCAGTCTGATTCTGTTTTGTTGAATGATAATAACACAAGGAAACTAGTGGAGGATTTTGCAAATGATCAACAACTTTTCTTTGACAATTGGGCTGTTTCGTTCGTGAGGCTCACCAGTGTTGGAGTAAAGACAGATGAAGAGGGTGAAATTCGACGTTTTTGTGCGGCAACTAATAATTTTATAAGAGATTAA 756 0.3942 MLQGNNTEQSDPGNRSVGGFSVIESAKRVLEMFCPGTVSCADIIALAARDAVEIAGGPRIQIPTGRRDGMVSIASNVRPNIVDTSFTMDEMVKLFSTKGLSLLDLVVLSGAHTIGSAHCHTFRDRFQQDSKGNLKLIDQTIDSSYADELIKQCPINAQPSMTVNNDPATSMLFDNQYFRNLLAHKVLFQSDSVLLNDNNTRKLVEDFANDQQLFFDNWAVSFVRLTSVGVKTDEEGEIRRFCAATNNFIRD 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02899 251 Gene3D - 5 246 - -
Car05g02899 251 PANTHER PEROXIDASE 18-RELATED 1 245 - -
Car05g02899 251 PANTHER PEROXIDASE 25-RELATED 1 245 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car05g02899 251 Gene3D Peroxidase, domain 2 82 225 - -
Car05g02899 251 Pfam Peroxidase 5 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car05g02899 251 PRINTS Haem peroxidase superfamily signature 166 181 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car05g02899 251 PRINTS Haem peroxidase superfamily signature 104 119 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car05g02899 251 PRINTS Haem peroxidase superfamily signature 56 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car05g02899 251 PRINTS Haem peroxidase superfamily signature 38 55 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car05g02899 251 CDD secretory_peroxidase 4 245 IPR033905 GO:0004601|GO:0042744
Car05g02899 251 ProSiteProfiles Plant heme peroxidase family profile. 1 246 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car05g02899 251 SUPERFAMILY Heme-dependent peroxidases 5 246 IPR010255 GO:0004601|GO:0006979|GO:0020037
Car05g02899 251 ProSitePatterns Peroxidases proximal heme-ligand signature. 104 114 IPR019793 -
Car05g02899 251 PRINTS Plant peroxidase signature 220 233 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car05g02899 251 PRINTS Plant peroxidase signature 56 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car05g02899 251 PRINTS Plant peroxidase signature 180 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car05g02899 251 PRINTS Plant peroxidase signature 18 31 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car05g02899 251 PRINTS Plant peroxidase signature 103 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car05g02899 251 PRINTS Plant peroxidase signature 164 179 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car05g02899 251 PRINTS Plant peroxidase signature 37 47 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02899 Car-Chr5 73972703 73976212 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02899 1 246 Peroxidase AT4G31760 61.382 1.21e-116 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02899 K00430 K18328 gmx:102664900 398.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02899 05 73972703 73976212 Car05g02899 05 73972703 73976212 ECH