Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02896 ATGGGATATCTCAATTCAGTTTTGTCCTCTTCAAGTCAGGTTCATGCTATGGATGATGCACCTGTAAGCGGTGGCGGTCTCAGTCATAATGGAAAATTCAGCTATGGGTATGCTAGCTCGCCTGGAAAGAGATCTTCAATGGAAGATTTTTATGAGACAAGAATTGACGGTGTTGATGGTGAAATAGTTGGACTTTTTGGAGTTTTTGATGGTCACGGCGGTGTTCGTGCTGCTGAGTATGTTAAGAAAAACTTATTTAGTAATTTGATCAGTCACCCAAAATTCATTTCTGACACCAAATCAGCAATATCTGATGCATATAATCATACCGATTCTGAATATCTGAAATCAGAAAAGAATCATCACAAAGATGCAGGATCTACTGCATCTACTGCCATTCTAGTTGGTGATCGGTTGCTTGTTGCAAATGTTGGAGACTCCAGGGCTGTTATTTGCAGGGGTGGTAATGCAATTGCTGTTTCTCGAGATCATAAGCCAGACCAAACTGATGAGAGGCGAAGGATTGAAGATGCAGGTGGCTTTGTTATGTGGGCTGGAACTTGGAGAGTTGGAGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACTTTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGGAAGAAAAAGTTGACAGTTCTCTTGAGTTTCTTATTCTGGCCAGTGATGGGTTATGGGATGTCGTCTCAAATGAGGAAGCTGTTGCTCTGATAAAACCAATTGAGGATGCAGAGGAGGCATCAAAGAGACTGATGCAAGAAGCATATCAAAGAGGTAGTGCTGACAATATCACTTGTGTCGTTGTTCGTTTCTTGATGAACCAAGGCACGTCTTCTCGTAGTAGCACACTAGCACCGGGTAATTAA 894 0.4217 MGYLNSVLSSSSQVHAMDDAPVSGGGLSHNGKFSYGYASSPGKRSSMEDFYETRIDGVDGEIVGLFGVFDGHGGVRAAEYVKKNLFSNLISHPKFISDTKSAISDAYNHTDSEYLKSEKNHHKDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERRRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVALIKPIEDAEEASKRLMQEAYQRGSADNITCVVVRFLMNQGTSSRSSTLAPGN 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02896 297 ProSitePatterns PPM-type phosphatase domain signature. 65 73 IPR000222 GO:0043169
Car05g02896 297 PANTHER ALPHABET, ISOFORM E-RELATED 3 290 - -
Car05g02896 297 SUPERFAMILY PP2C-like 29 280 IPR036457 -
Car05g02896 297 PANTHER PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C 3 290 - -
Car05g02896 297 SMART PP2C_4 24 278 IPR001932 -
Car05g02896 297 CDD PP2Cc 33 280 IPR001932 -
Car05g02896 297 Pfam Protein phosphatase 2C 63 273 IPR001932 -
Car05g02896 297 SMART PP2C_SIG_2 29 280 IPR001932 -
Car05g02896 297 Gene3D - 26 286 IPR036457 -
Car05g02896 297 ProSiteProfiles PPM-type phosphatase domain profile. 34 280 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02896 Car-Chr5 73935550 73940170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02896 1 295 PP2C-type Phosphatase Gene Family AT4G31750 87.500 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02896 K17506 - gmx:100795017 543.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02896 05 73935550 73940170 Car05g02896 05 73935550 73940170 ECH