Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02891 ATGACTACTATATCAACAAAAATATTTGTTGTGCATATGTCACCAAAACTTGGCTCTCGATTGTTTAACTTAGCTAGAAAAATTGGAATGATGAGTCAAGGCTATGTTTGGATAGTAACCGATAGTATGGTTAATTTATTCAATTCATTGAATTTTTTGGAGAAGGAATCAATGGAAGGTGTATTAGGTGTTAGGCCTTATATTCCAAGAACAAAAAAGGTTGAAGATTTTAGAGCTAGATGGAAAAGAAAATTTGTAAGTGATAATCCAACACTTTTTGACACAAATTTGAACGTTTTTGGAATACGGGCTTATGATGCTACTACATCATTAGCAATGGCTATTGAGAATGTTGGAATTGGTCAACAAAATGGTGAGAAATTGAGTGAGGCTTTGTCAAACATTACATTTAATGGACTTGGTGGTGATTTTAGTGTTGTTGGTGGGAAGTTAAATGTATCAATATATGAGGTCATTAATGTGATGGGTGATGGGGAAAAGAAGGTTGGTTATTGGACACCAGATAAAGGGTTGACTAAAAATTTGGACAGAAAAGACATAAACAATAGCACATATTCTTTTTCTAAAAATGATATTGGATCAATCATATGGCCAGGGGATACGCATTATGTTCCAAAGGGATGGGAAATTCCAGCTATTGGAAAGAAGTTGAAGATAGGTGTTCCATTTAAAAATGGGGACAACTACACTGAATTTGTGAAAATAATACATGATAATAATACCAATTCAACACAAGTCACTGGTTTCTGTATTGAAGTCTTCAAAGCTGTGTTGGAAGTGTTGCCTTATGCCTTTCCACCATATGAATTTGTTCCATTTGAAAAGCCTGATGGTGAAATGGCAGGAACTTACGATGAGTTGATCACTCAACTTTGCAATGGGAAGTTCGATGCAGTAGTGGGGGATATAACAATAATGACTAACAGGTCAAAGTGTGTTGATTTCACAATGCCATACACAGAATCTGGTGTGACAATGGTTGTATCACTGAAAAACAAGAGAAAGGAAAATGCATGGGCTTTTTTGAAGCCACTTACATGGGATCTTTGGGTAACATCAGCTTGTTCATTTGTATTCATTGGATTTGTTGTATGGGTCCTTGAACATCGAATAAACAACGATTTCAGGGGACCACTCTCTCATCAGATTGGCACAAGCTTATGGTTTTCTTTCTCAACTATGGTCTATGCTCATAGAGAGAAAGTGGTGAGCAATTTGGGTAGACTTGTGGTGATAGTATGGGTTTTTGTGGTTCTAATTTTGGTTCAAAGTTACACTGCAAGCTTGACTTCACTCATAACAGTTGAAGAACTAAGTCCAGCTATTACAGATTTCAATCAACTTCTTAAGAACAAGATGAATGTTGGCTATCTCAACGGTTCTTTTGTTTATGGAATCTTGAAGAACTTAGGTTTTCAAGATTCACAACTCATAACTTATCAATCCCCTGAAGAATGTAATGAGCTTTTCATAAAAGGAACTGTAAATGGTGGCATTGATGCTGCTTTTGATGAAGTTCCATATGTTAAGCACTTTCTTGGAACTTATAGTTGTTCAAAGTATGTCATGGTTGAACCAAGATTTAAAACTGGTGGTTTTGGCTATGCATTCCCAAAAGGTTCACCTCTTGTAGCTGACATTTCAAGGGCAATCTTAAATGTGACTCAAGGAGACAAAATGAAAACAATTGAAGATGCATGGTTCAAGCAAAGTACTTGCCAAGATTCTAGTGCAGAAATTTCATCTAACAACCGTCTTGGCCTTGAAAGCTTTTGGGGTCTATTTCTCATTGCATGGATATCTTCCTTATTAGCACTCCTAATCTTTTTTGTGACATTTCTATATCAGCACAAACATATTTGGTTACACAATAATACCAGTACTTCAATATGGAGAAGTATTAAAGTCTTGGCAAGGATATTTGATCAAAGAGACTTGGACAGTCACACATTCAAGAAAAGTAAAATGATTGGAAATAAAAATGAAAGCATTTGTGCGCATCATGATGATTTAGGTGTAGTTGAGGCCTCTCCAGGTACACATTGTCCACCTAGTCCATCTAGTCAAACTGAATCAAACTTTTCCGTTTATGGTGATTTTAGTCCAAAACATGGTGATATTAATCATTGTCAAAACACAGAAATTGATGTCGCACATATTACTAATGAAGAAGTTGTCATTGTGAACAACTGTGAAATCAACTCCCAAGCAACATGA 2238 0.3588 MTTISTKIFVVHMSPKLGSRLFNLARKIGMMSQGYVWIVTDSMVNLFNSLNFLEKESMEGVLGVRPYIPRTKKVEDFRARWKRKFVSDNPTLFDTNLNVFGIRAYDATTSLAMAIENVGIGQQNGEKLSEALSNITFNGLGGDFSVVGGKLNVSIYEVINVMGDGEKKVGYWTPDKGLTKNLDRKDINNSTYSFSKNDIGSIIWPGDTHYVPKGWEIPAIGKKLKIGVPFKNGDNYTEFVKIIHDNNTNSTQVTGFCIEVFKAVLEVLPYAFPPYEFVPFEKPDGEMAGTYDELITQLCNGKFDAVVGDITIMTNRSKCVDFTMPYTESGVTMVVSLKNKRKENAWAFLKPLTWDLWVTSACSFVFIGFVVWVLEHRINNDFRGPLSHQIGTSLWFSFSTMVYAHREKVVSNLGRLVVIVWVFVVLILVQSYTASLTSLITVEELSPAITDFNQLLKNKMNVGYLNGSFVYGILKNLGFQDSQLITYQSPEECNELFIKGTVNGGIDAAFDEVPYVKHFLGTYSCSKYVMVEPRFKTGGFGYAFPKGSPLVADISRAILNVTQGDKMKTIEDAWFKQSTCQDSSAEISSNNRLGLESFWGLFLIAWISSLLALLIFFVTFLYQHKHIWLHNNTSTSIWRSIKVLARIFDQRDLDSHTFKKSKMIGNKNESICAHHDDLGVVEASPGTHCPPSPSSQTESNFSVYGDFSPKHGDINHCQNTEIDVAHITNEEVVIVNNCEINSQAT 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02891 745 CDD GluR_Plant 222 575 - -
Car05g02891 745 Pfam Receptor family ligand binding region 6 161 IPR001828 -
Car05g02891 745 SMART GluR_14 223 577 IPR001320 GO:0015276|GO:0016020
Car05g02891 745 Pfam Bacterial extracellular solute-binding proteins, family 3 250 576 IPR001638 -
Car05g02891 745 Pfam Ligand-gated ion channel 577 607 IPR001320 GO:0015276|GO:0016020
Car05g02891 745 SUPERFAMILY Periplasmic binding protein-like II 202 578 - -
Car05g02891 745 Gene3D - 479 582 - -
Car05g02891 745 Gene3D - 345 477 - -
Car05g02891 745 SUPERFAMILY Periplasmic binding protein-like I 5 216 IPR028082 -
Car05g02891 745 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 2 674 - -
Car05g02891 745 PANTHER GLUTAMATE RECEPTOR 2.9 2 674 - -
Car05g02891 745 Gene3D - 1 224 - -
Car05g02891 745 Gene3D - 225 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02891 Car-Chr5 73864092 73867876 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02891 1 739 Ion Channels AT2G29120 46.789 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02891 K05387 - tcc:18587654 813.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02891 05 73864092 73867876 Car05g02891 05 73864092 73867876 ECH