Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02878 ATGATGCACATGACCTTCTACTGGAGCAAAAAAGTGACTCTCCTAATAGATTCATGGAAAACTGATTCATGGACGAGTTACATACTGAGTCTACTCGCTTGCCTAATCGTTTCCATTTTCTATCAGCTTCTCGAAAACCGCCGTATTCGCCTCAAACTATTCGCCTCCGGAAAGCAGTTTCCGGCCGAGATCCAGACTCCTCTTATTCAACGGAAGCTTGTCGGAAGTAGAGCTAAATTAGGCGTGAAACTCGCCGGAGCAGTTCTGTTCGGTGTGAGCTCGGCGATCGGGTATTTCTTGATGCTGTCTGTTATGTCGTTTAACGGTGGAGTGTttattgctattgttgttggtcttgctattggttacttgttcttCAGGAGTGATGGTGAAGATTCTTTCGTCGGTGATAGTTCTTGCGCATGTGCTTGA 432 0.4213 MMHMTFYWSKKVTLLIDSWKTDSWTSYILSLLACLIVSIFYQLLENRRIRLKLFASGKQFPAEIQTPLIQRKLVGSRAKLGVKLAGAVLFGVSSAIGYFLMLSVMSFNGGVFIAIVVGLAIGYLFFRSDGEDSFVGDSSCACA 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02878 143 Pfam Ctr copper transporter family 4 126 IPR007274 GO:0005375|GO:0016021|GO:0035434
Car05g02878 143 PANTHER CTR FAMILY COPPER TRANSPORTER 1 143 - -
Car05g02878 143 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 143 IPR007274 GO:0005375|GO:0016021|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02878 Car-Chr5 73731577 73732008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02878 1 143 Inorganic Solute Cotransporters AT5G20650 54.967 6.96e-51 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02878 K14686 - gmx:100805457 232.646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02878 05 73731577 73732008 Car05g02878 05 73731577 73732008 ECH
Car05g02878 05 73731577 73732008 Car04g03261 04 61064747 61065539 ECH
Car07g00378 07 3340499 3341257 Car05g02878 05 73731577 73732008 ECH
Car07g03012 07 56872098 56873887 Car05g02878 05 73731577 73732008 ECH