Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02872 ATGAGTTTACGAAAGGGCTCCAAGGTTTGGGTCCCTGACAGGGATTTGGCTTGGTTACCTGCTGAAGTTCTCAGTACTTCTGGTAAACAAGTTCGCGTTGAAACCGATTCCGGCAACAAAGTTCTCGTTGTTCCGGAGAAACTTTTCCCAAGAGATGCAGATGAAGACGAGCACGTTGGTGTCGAAGATATGACGAGGTTGGCTTATTTGAATGAACCAGGAGTGTTGTACAATCTTCGTAGAAGATATGCTTTGAATGATATATATACATATACGGGGAGCATTTTAATAGCTGTTAATCCGTTCACAAAGCTTCCTCATTTGTACAACAACCATATGATGGAGCAGTATAAGGGAGCTCCGTTTGGTGAGCTCAGTCCACATGTATTTGCTGTTGCTGATGCATCTTATAGAGCAATGATGAATGGAGGTCAAAGCCAATCTATCTTGGTTAGCGGTGAAAGTGGTGCTGGGAAAACTGAGACATCAAAATTGATTATGCAGTATCTTACCTTTGTTGGTGGGCGTGCTGTTTGTGATGATAGAACAGTTGAACAGCAAGTTCTTGAATCAAATCCACTTTTAGAGGCATTTGGCAATGCAAGGACTGTCAGGAATGACAATTCAAGCCGTTTTGGGAAGTTCGTTGAAattcagtttgattcaagtggtaaaatatctggtgctgctgttagaacttacttattggaaagatcacgagtagtgcaaactacagatcctgaaagaaattatcactgcttttatcagttgtgtgcaTCTGAAAGGGATGTAGAGAAGTATAAATTAGGACATCCAAGTCACTTCCACTATTTAAATCAAAGTAAAGTTTATGAATTAGATGGGGTAAGCAGCACAGAAGAATACATAAAGACGAGGAGAGCAATGGATGTAGTTGGCATAAGTCACGAGGATCAGGAAGCCATATTTTGCACCTTAGCTGCAATTTTACATCTGGGAAATGTTGAATTTTCTCCTGGGAAAGAGCACGACTCGTCAATGATAAAGGATGAGAAGTCAATATTTCATTTGCAGATGGCTGCTAACCTTTTCAAGTGTGATGTGAACCTACTGCGAGCAACATTATGTACTCGTTCAATACAAACCCGCGAAGGAAATATAGTCAAAGCTCTTGATTGTAATGCCGCTGTTGCTGGTAGGGATGTTTTGGCGAAAACTGTCTATGCTCGTTTGTTTGATTGGCTTGTTGATAAGATCAATAAAACTGTTGGGCAAGACATCAATTCCCAGATGAAAATTGGAATATTAGATATATATGGTTTTGAGTGCTTTAAGGATAACAGTTTTGAGCAATTCTGCATCAATTTTGCTAATGAAAAGCTTCAACAACATTTTAATGAGCATGTATTCAAAATGGAGCAAGAGGAGTACAGCAAAGAAGAAATTAACTGGAGTTACATTGAATTTATAGACAACCAAGATGTTTTAGATTTGATTGAAAAGAAACCCATTGGTATCATTGCCCTGTTAGATGAAGCTTGCATGTTTCCAAAATCTACGCACGAAACATTCTCAACCAAGTTGTTTCAGCACTTCTTGTCCCACCCTAGGTTAGGAAAGGAGAAGTTTTCAGAAACAGATTTTACCGTTTCCCATTATGCTGGAAAGGTCACTTACCATACAGTCACATTTTTAGACAAAAATCGTGATTATGTAGTTCTAGAACACTGTAATGTATTATCTTCTTCGAAATGCCCCTTTGTGTCGGGTCTTTTTCCTATGTTACCAGAGGAATCTTCAAGGTCATCATACAAGTTTTCTTCTGTGGCTTCCAGATTTAAGCAACAACTTCAAGCACTTATGGAGACACTTAACACAACAGAGCCTCATTACATTCGTTGTGTCAAGCCAAATTCTTCTAACCTACCACAAAAGTTTGAAAATACAAGTGTCTTACATCAATTACGTTGTGGGGGTGTGCTTGAGGCTGTTCGGATAAGTCTGGCAGGTTACCCAACTCGAAGGACTTACTCAGAGTTTGTAGATCGCTTTGGATTAATAGCTCCTGAGTTTATGGATGGAAGTTATGATGATAGAGCTACAACTCATAATATATTGCAAAAGCTAAAACTTGAGAATTTTCAGCTGGGTAGGACTAAAGTGTTTCTCAGGGCTGGTCAAATTGGTATTTTAGACTCTAGGCGTGCTGAAGTTTTGGACAATGCTGCAAAGTGTATTCAGCGTCGACTACGTACATTTATTGCACACAGGGATTTCATCTCAATCCGAGCTGCCGCAGTTTCTCTTCAAGCATTGTGCAGGGGATGCCTTGTACAGAAGATATATGCTTCTAAACGGGAGACAGCAGCAGCTATCTCCATTCAGAATTACATTCGTATGTGTCTGATGCAGCGTGCTTACGCGGCATTATATTCTTCTGCCATTATCATACAATCAAATGTCCGTGGTTTCACAATTCGCCAAAGATTTTTGCACAGAAAAGAAGACAAAGCTGCTACTATTATTCAGGCCTATTGGAGGATGCACAAGGTCCGGTCTGCTTTCAAACAATGTCAATTTTCAGTTGTGGCAATACAATGCCTTTGGCGGTGTAAACAAGCGAAAAGACAGTTTCGCAGACTTAAACAAGAGGCAAGTGAAGCTGGTGCCCTGCGTTTAGCTAAGACTAAACTTGAGAAACAATTGGAGGAGCTCACATGGCGTTTGCATCTTGAAAAAAAAATTAGGGTGTCTAATGAAGATGCTAAGCAAGTTGAGATTTCCAAACTTCAGAAGATGTTGGAAGCTCTGAATGGTGAATTAGATGAAGCTAAAGTGGCAACAATTAATGAGTTGAATAAGAATGCAATTTTGCAAAATCAGTTGCTAATGTCAGCAGAGGAAAAATCTGCTTTAGAAAGAGAGCTAGTTGAAATGAATGACGTGCGAAAAGAAAATGCTATGTTGAAGGCTTCTCTGGATGCCTTTGAAAAGAAGAGCACAACTTTGGAGCTTGAGCTTGTGAATGCTCAGAAAGACCATAACGAAACCATTCAGAAAATGAGGAATTTTGAACTGAAGAGTTCTCAACTTGCGCAAAATGTGAAAAGTCTTGAAGAAAAGCTATTGAGTTTGGAGAATGAAAATCACGTGCTTCGTCAGAAAGCCTTATGTGTATCTCCTAAGAGTAATCGTCCAGGTCTTGCAAAGTCATCATCAGAAAAAACTTCAAATGCAACAAGCCCCCGTACTGATCAAAAGTCACTATTTGAATCACCGACTCCCACAAGGCTTATTTCCTCTTTAACACGTGGCTTGTCTGATTCTCGTCGATATAAATTAACAGCAGAAAAGCACCAGGATAACTATGAATTCCTCACTAGGTGTATCAAAGAGGATTTGGGGTTCAAAAATGGTAAACCTGTGGCAGCTAGTATCATATACAAATGTCTTCTACATTGGCATGCATTTGAATCTGAGCGCACAGCCATATTTGATTACATAATTGATGGAATTAATGATGTCATAAAAGTTAGCGACGATGATGCTGTCTTGCCATATTGGCTGTCCAATACCTCCGCACTTGTGTGCCTTTTACAGAGGAACTTGCGTTCAAATGGTTTTTTAACTACCACTGCTCAGCGTTATGCTGTATCATCTGGCTTGACTTGCAGGACAGGGCATGGAGTGAAGTCTCCATTGAAGTTACTTGGATATAATGATGGTATGTCACATGTGGAGGCAAGATATCCAGCTATTCTTTTTAAACAACAACTAACTGCTTGTGTAGAGAAGATTTTTGGCCATTTACGTGATAATTTGAAAAGGGAACTTTCTCCACTTCTAGCATTATGTATTCAGGCACCCAAAGCAGGACGCGTGCAGAGTGGGAAATCATCTAGATCACCTGGAGGGCTTCCTCAACAATCACCTAGTGGTCAATGGGACAACATCACCAAGTTTTTGGATTCTCTGTTAAACCGATTACGTGAAAATCATATACCATCATTCTTCATCCGCAAGCTAGTTACACAGGTCTTTTCCTTCATCAATATGACACTGTTCAACAGTCTTCTTTTGCGGCGTGAATGTTGTACTTTCTCGAATGGTGAATATGTAAAGTCTGGTCTTGCAGAACTGGAGAAGTGGATAGTTAATGCAAGTGAGGAGTATGCAGGAACATCCTGGCACGAGCTGAATTATATCAGACAAGCTGTTGGGTTTCTGGTTATACATCAGAAGAGGAAGAAATCTTTGGAAGAAATTAGGCAGGATCTTTGTCCGGCATTAACTGTGAGACAAATCTATCGAATTAGTACTATGTACTGGGATGACAAGTATGGAACCCAGAGTGTGTCCAACGAGGTAGTTGGTGAAATGAGGGAAATTGTGAGCAAGGACAACCATAGTCCAACCTCAAGTTCGTTCTTGATGGATGACGATATGAGCATTCCTTTTTCTGCTGAAGACATAGATATGGCGATCCCTGCTGTGAATACTGATGATATTGAGCTCCCAGCATTTTTGTGTGAATATCCTTGTGCCAAGTTTCTTGTTTTGCATGAGTAA 4548 0.3907 MSLRKGSKVWVPDRDLAWLPAEVLSTSGKQVRVETDSGNKVLVVPEKLFPRDADEDEHVGVEDMTRLAYLNEPGVLYNLRRRYALNDIYTYTGSILIAVNPFTKLPHLYNNHMMEQYKGAPFGELSPHVFAVADASYRAMMNGGQSQSILVSGESGAGKTETSKLIMQYLTFVGGRAVCDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDSSGKISGAAVRTYLLERSRVVQTTDPERNYHCFYQLCASERDVEKYKLGHPSHFHYLNQSKVYELDGVSSTEEYIKTRRAMDVVGISHEDQEAIFCTLAAILHLGNVEFSPGKEHDSSMIKDEKSIFHLQMAANLFKCDVNLLRATLCTRSIQTREGNIVKALDCNAAVAGRDVLAKTVYARLFDWLVDKINKTVGQDINSQMKIGILDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYSKEEINWSYIEFIDNQDVLDLIEKKPIGIIALLDEACMFPKSTHETFSTKLFQHFLSHPRLGKEKFSETDFTVSHYAGKVTYHTVTFLDKNRDYVVLEHCNVLSSSKCPFVSGLFPMLPEESSRSSYKFSSVASRFKQQLQALMETLNTTEPHYIRCVKPNSSNLPQKFENTSVLHQLRCGGVLEAVRISLAGYPTRRTYSEFVDRFGLIAPEFMDGSYDDRATTHNILQKLKLENFQLGRTKVFLRAGQIGILDSRRAEVLDNAAKCIQRRLRTFIAHRDFISIRAAAVSLQALCRGCLVQKIYASKRETAAAISIQNYIRMCLMQRAYAALYSSAIIIQSNVRGFTIRQRFLHRKEDKAATIIQAYWRMHKVRSAFKQCQFSVVAIQCLWRCKQAKRQFRRLKQEASEAGALRLAKTKLEKQLEELTWRLHLEKKIRVSNEDAKQVEISKLQKMLEALNGELDEAKVATINELNKNAILQNQLLMSAEEKSALERELVEMNDVRKENAMLKASLDAFEKKSTTLELELVNAQKDHNETIQKMRNFELKSSQLAQNVKSLEEKLLSLENENHVLRQKALCVSPKSNRPGLAKSSSEKTSNATSPRTDQKSLFESPTPTRLISSLTRGLSDSRRYKLTAEKHQDNYEFLTRCIKEDLGFKNGKPVAASIIYKCLLHWHAFESERTAIFDYIIDGINDVIKVSDDDAVLPYWLSNTSALVCLLQRNLRSNGFLTTTAQRYAVSSGLTCRTGHGVKSPLKLLGYNDGMSHVEARYPAILFKQQLTACVEKIFGHLRDNLKRELSPLLALCIQAPKAGRVQSGKSSRSPGGLPQQSPSGQWDNITKFLDSLLNRLRENHIPSFFIRKLVTQVFSFINMTLFNSLLLRRECCTFSNGEYVKSGLAELEKWIVNASEEYAGTSWHELNYIRQAVGFLVIHQKRKKSLEEIRQDLCPALTVRQIYRISTMYWDDKYGTQSVSNEVVGEMREIVSKDNHSPTSSSFLMDDDMSIPFSAEDIDMAIPAVNTDDIELPAFLCEYPCAKFLVLHE 1515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02872 1515 ProSiteProfiles Myosin motor domain profile. 59 729 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car05g02872 1515 MobiDBLite consensus disorder prediction 1287 1308 - -
Car05g02872 1515 MobiDBLite consensus disorder prediction 1055 1087 - -
Car05g02872 1515 SMART DIL_2 1334 1441 IPR002710 -
Car05g02872 1515 Pfam DIL domain 1335 1438 IPR002710 -
Car05g02872 1515 Pfam Myosin head (motor domain) 61 717 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car05g02872 1515 Gene3D - 731 780 - -
Car05g02872 1515 Gene3D - 781 829 - -
Car05g02872 1515 Gene3D - 830 879 - -
Car05g02872 1515 ProSiteProfiles IQ motif profile. 852 880 IPR000048 GO:0005515
Car05g02872 1515 Gene3D - 249 306 - -
Car05g02872 1515 Coils Coil 864 884 - -
Car05g02872 1515 Coils Coil 972 1048 - -
Car05g02872 1515 PANTHER PROTEIN OPAQUE1-LIKE 3 1512 - -
Car05g02872 1515 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 779 827 IPR027417 -
Car05g02872 1515 ProSiteProfiles Dilute domain profile. 1159 1459 IPR002710 -
Car05g02872 1515 ProSiteProfiles IQ motif profile. 755 784 IPR000048 GO:0005515
Car05g02872 1515 CDD MYSc_Myo11 73 717 IPR036018 -
Car05g02872 1515 SMART MYSc_2a 53 730 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car05g02872 1515 Coils Coil 913 940 - -
Car05g02872 1515 Gene3D Myosin VI head, motor domain, U50 subdomain 308 598 - -
Car05g02872 1515 ProSiteProfiles IQ motif profile. 803 832 IPR000048 GO:0005515
Car05g02872 1515 MobiDBLite consensus disorder prediction 1058 1087 - -
Car05g02872 1515 PRINTS Myosin heavy chain signature 89 108 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car05g02872 1515 PRINTS Myosin heavy chain signature 146 171 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car05g02872 1515 PRINTS Myosin heavy chain signature 193 220 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car05g02872 1515 PRINTS Myosin heavy chain signature 425 453 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car05g02872 1515 PRINTS Myosin heavy chain signature 478 506 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car05g02872 1515 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 778 IPR027417 -
Car05g02872 1515 CDD MyosinXI_CBD 1110 1482 IPR037975 GO:0007015
Car05g02872 1515 Gene3D - 663 730 - -
Car05g02872 1515 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 824 883 IPR027417 -
Car05g02872 1515 SMART iq_5 779 801 IPR000048 GO:0005515
Car05g02872 1515 SMART iq_5 754 776 IPR000048 GO:0005515
Car05g02872 1515 SMART iq_5 802 824 IPR000048 GO:0005515
Car05g02872 1515 SMART iq_5 827 849 IPR000048 GO:0005515
Car05g02872 1515 SMART iq_5 731 753 IPR000048 GO:0005515
Car05g02872 1515 SMART iq_5 850 872 IPR000048 GO:0005515
Car05g02872 1515 Pfam IQ calmodulin-binding motif 805 823 IPR000048 GO:0005515
Car05g02872 1515 Pfam IQ calmodulin-binding motif 756 775 IPR000048 GO:0005515
Car05g02872 1515 Pfam IQ calmodulin-binding motif 830 849 IPR000048 GO:0005515
Car05g02872 1515 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 4 53 IPR004009 GO:0003774|GO:0005524|GO:0016459
Car05g02872 1515 ProSiteProfiles IQ motif profile. 828 857 IPR000048 GO:0005515
Car05g02872 1515 PANTHER MYOSIN 3 1512 - -
Car05g02872 1515 Pfam Myosin N-terminal SH3-like domain 6 43 IPR004009 GO:0003774|GO:0005524|GO:0016459
Car05g02872 1515 Gene3D Kinesin motor domain 62 659 IPR036961 -
Car05g02872 1515 Coils Coil 942 968 - -
Car05g02872 1515 Gene3D - 435 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02872 Car-Chr5 73668434 73691902 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02872 1 1512 Myosins gene family AT4G33200 71.825 0.0 2241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02872 K10357 - gmx:100796413 2585.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02872 05 73668434 73691902 Car05g02872 05 73668434 73691902 ECH
Car05g02872 05 73668434 73691902 Car04g03282 04 61296996 61327460 PCT