Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02864 ATGGATGGTAATAAGCATCAAGGTGGTGAAGTAAGTATGATGGAGAAGAAAAGAGAAGTGGTGGTGGCAATTTCAAATGTAGGTGGAGAGAACcatgatcatgatcatgagcatgaacatgaacatgaacataaccatgatcatgaGTTGAAAGGGTTTGAATCTTCACCTCACTTTGTTTCAAAGTCTCCACCTTTTAACTCTGCTTCCCCTGAGATAAGATTCATTCCAAGTCCAAATAAACCCCCAAAAATTCCCAGTACAAATGCCAACCTTACAACAAGAAAATCACTTGCAAGATCAATGTATTCTAAGCCCAAATCAAGGTTTGGTGAACAACCTTACCCCAATGATGGAACCATTTTAGAAGAGAGTGTTACTTGTTCAACTTTGCAAGAACAATTAGCTTTTAGTTCACCTTATAGGAACTCATTCAATAAAGCATCACAGTCGCCTAATAACAAATCTGGAACGGTTAATAGAACCGTTTCAATTACTTCGGTCGTCACTCCCAAAACACCTTTGATGGCGTCTCCGGGTCCTGCTGGTGAGGATCCTGATGAAATCATTTACAGGAAAGTTGAATTTAGTAAAGGCAAGCGTAAGAGACTAAAGACTAAGGTTTTGATTGAATTGTTCATGTTTGCATTCATTACAAGTAGCTTGCTTGCTAGCTTAACTGTTGCAGAACTGAAAAGGACAAAGATTTGGAGTTTGGGGCTTTGGAGGTGGTGTATGCTTGTGATGGTGACCTTTTGTGGCATGTTGGTTACCAAATGGTTCATGCACATTGTCGTTTTCTTGATTGAAATGAACTTCTTGTTGAAGAAAAAGGTTCTTTATTTTGTCCATGGGCTTAAGAAATGTGTCCAAGTCTTCATTTGGATTAGTTCGGTTCTCCTCACATGGGTGCTTTTTATCAATCGCGGGGTCCAACGATCGAAATTGGCCTCAAAGATTTTGGATGGTGTAACCTGGACTCTTGTTTCCCTTCTCATTGGAGGATTTTTATGGGTCATAAAGACATTGTTGCTAAAGATTTTGGCATCGAATTTCCACGTCAAATCTTTCTTTGATCGAATTCAAGAATCGATATTCCATCAGTATCTTCTGCAGACACTCTCTGGGCCTCCTCTTATGGAAGAGGCCGAGAAGTTTGGGCGATCTCAAAGTATCAGCCATTTTAGTTTCAGGAGTACAACCGGTAAAGGCAGCACAAAGAAAGAGGTTATTGATATGGCAAAGCTTCACAAAATGAAGCAAGAGAAAGTTTCCGCGTGGACCATGAAGATTTTGGTAGATGCAGTGATGAATTCAAGGCTGTCCACAATCTCTAATTCACTAGATGAAAGTTTTTATGATGGAGAACCTGAACAAACTGATAAAGAAATTACTAATGAGATGGAAGCAACTGCTGCTGCATATTACATTTTCAGGAACGTTGCTGCTTCCCCGAGTTGCACAGACATCGACGAAGATGAACTCCGTAGGTTCTTGATTAAGGAAGAAGTGCCTTTTGTGTTTCCCCTACTGGCTCAATCAGAGACAGGGCTAATTACCAGAAAATCTTTAGCTGATTGGGTGTTGAAGGTATATCAAGAACGTAAAGCACTTGCACATGCGTTGAGCGACACAAAAACGGCTGTAAAACAGTTAAACAAGCTTGTGACAGGGGTCATAGTAGTGGTGACCATAGTAGTCTGGCTTCTTCTAATGGAGATTGCAACAACAAAAGTACTTGTATTCCTTTCGTCGCAGCTAGTACTTGCAGCTTTCATGTTCGGAAACACGTGCAAGAATATATTTGAAGCCATCATCTTCGTGTTTGTAATGCATCCATTCGATGTTGGCGATCGATGTGTTATAGATGGTGTTGAGCTATTGGTTGAAGAAATGAATATACTGACAACAGTATTCTTGAAGCTTAATAATGAAAAGGTGTACTATCCTAATTCTGTTCTGGCCACGAAACCGATTAGCAATTACTACAGAAGCCCGAATATGGTTGACAACGTACATTTTTCGATTGATTTTACGACACCAGCTGAGAAAATTGGGGCACTGAAAGAAAAAGTTAAGAGGTATTTGGAGAGGAATCCGCAATACTGGTATCCGAATTTCGGGTTGGTAGTGAATGAGATTGAAAATGTAAATAAGATTAAGATGGGTCTTTTTGTTACTCACACTATGAACTTTCAAGAGTTTGGGGAGAAGACCAAGAGGAGAAGTGAACTGGTGATGGAAGTAAAGAAAATATTTGAAGAACTCAATATCAGATACAACCTTATTCCGCAAGGTGTTCATGTCAGACACATGGAACATGATTCAAATTTACTCAAGTGA 2343 0.3888 MDGNKHQGGEVSMMEKKREVVVAISNVGGENHDHDHEHEHEHEHNHDHELKGFESSPHFVSKSPPFNSASPEIRFIPSPNKPPKIPSTNANLTTRKSLARSMYSKPKSRFGEQPYPNDGTILEESVTCSTLQEQLAFSSPYRNSFNKASQSPNNKSGTVNRTVSITSVVTPKTPLMASPGPAGEDPDEIIYRKVEFSKGKRKRLKTKVLIELFMFAFITSSLLASLTVAELKRTKIWSLGLWRWCMLVMVTFCGMLVTKWFMHIVVFLIEMNFLLKKKVLYFVHGLKKCVQVFIWISSVLLTWVLFINRGVQRSKLASKILDGVTWTLVSLLIGGFLWVIKTLLLKILASNFHVKSFFDRIQESIFHQYLLQTLSGPPLMEEAEKFGRSQSISHFSFRSTTGKGSTKKEVIDMAKLHKMKQEKVSAWTMKILVDAVMNSRLSTISNSLDESFYDGEPEQTDKEITNEMEATAAAYYIFRNVAASPSCTDIDEDELRRFLIKEEVPFVFPLLAQSETGLITRKSLADWVLKVYQERKALAHALSDTKTAVKQLNKLVTGVIVVVTIVVWLLLMEIATTKVLVFLSSQLVLAAFMFGNTCKNIFEAIIFVFVMHPFDVGDRCVIDGVELLVEEMNILTTVFLKLNNEKVYYPNSVLATKPISNYYRSPNMVDNVHFSIDFTTPAEKIGALKEKVKRYLERNPQYWYPNFGLVVNEIENVNKIKMGLFVTHTMNFQEFGEKTKRRSELVMEVKKIFEELNIRYNLIPQGVHVRHMEHDSNLLK 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02864 780 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 17 769 IPR016688 -
Car05g02864 780 PIRSF Memb_At2g17000 7 778 IPR016688 -
Car05g02864 780 MobiDBLite consensus disorder prediction 29 55 - -
Car05g02864 780 MobiDBLite consensus disorder prediction 27 90 - -
Car05g02864 780 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 9 17 769 - -
Car05g02864 780 Pfam Mechanosensitive ion channel 554 759 IPR006685 GO:0016020|GO:0055085
Car05g02864 780 Gene3D - 613 662 IPR023408 -
Car05g02864 780 SUPERFAMILY Sm-like ribonucleoproteins 603 662 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02864 Car-Chr5 73625384 73629063 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02864 62 769 Mechanosensitive Ion Channel Family AT5G12080 58.205 0.0 827
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02864 K22048 - gmx:100803107 1155.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02864 05 73625384 73629063 Car05g02864 05 73625384 73629063 ECH