Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02863 ATGAACTTCAAAAACAGTCCTCAAACTCAGCAGAGCTTGTCTCGGCAGTCAtcgaagtcgaagtcgaattcgagggcgaagccgaagCAAGAGCCGCTTAGCCCATTTGCTGGTGGTGGATGTTGTCGTGGCTTCACCAGTGTTAAGACTGTAGCATCCACCACATCAACCTTTCAACACCATCAGCTCCAACAGCGTTATGACACTTTGGAAGTGAAGGTGGCTGATTTGGAAAAGGAGGTGCAAAAACAAACAGAACTACGAGTGATGTATAGGAAAAGAATGGAAAGAACACAAGACTACTTAAGGTACTGTCTCCAAATAGCACAAGAGAATGGAATCTTGGAACACATTATCCACACAAAAGGTGAACTACAACAATCTCCTCTTTACAACCTCAACTCCATTACCAATAGTCCTCTAAATCCCACTCCTATGCACCAAAACCACCCCAATCTAGAGGCCATCATTGATCAAGCCAAAATCAATGGATGGTATATTAACCCAACCGAGATTCAAATGGAAGAGAAAATAGGGCAAGGAAGCACAGCAGAAATTCATAGAGGAACATGGCGTGGATTTGATGTAGCAGTGAAATGCATATCAACCGAATTCTTCCGTACAAATGCAAACGGTGTTGAATTCTTTGCTCAAGAAGTTGAAACACTCTCAAAGCAACGACACCGTTTTGTTCTTCATCTAATGGGTGCGTGCCTTGACCCTCCTAATCATGCATGGCTTGTAACAGAGTATCTCAAAACAACGTTGAAGGAATGGCTTCATGGGCCTGGCAAAAGGCGCAGAGACAGAATTGTGTCACTTCCTTCTTTTAAAGAGAGACTCATTAGGGCCTTTGAGATAGCCCAAGCAATGCAGTATCTGCATGACCAAAGGCCCAAaattgttcaccgtgacttaaagcccagtaatgtttttttggaccatgatatgcatgttagagttgctgattttggACATGCCCGTTTCTTAGATGATGGGGAAATGGCTCTCACTGGAGAAACCGGAACATACGTGTATATGGCACCTGAGGTAATACGATGTGAGCCATATAATGAAAAGTGTGATGTATATAGTTTTGGAGTGATATTCAACGAGCTTCTGACTGGAAAACACCCCTACATTGAGACAGAATATGGTCCTGCCAAGATTGCTATGGAAGTTGTAGAGGGAAAATTGAGGCCTATGTTTCCTTCAGGGGACGATGGTGAACAACTTGGAGAATTGATTGACCTTATACGCCTTTGTTGGGATGGAAATCCTTCAACTAGACCATCCTTTGCTACAATTACCCATATCCTCAAAACTTATGCTAATAGACTCCTTCAATTTTAA 1353 0.3925 MNFKNSPQTQQSLSRQSSKSKSNSRAKPKQEPLSPFAGGGCCRGFTSVKTVASTTSTFQHHQLQQRYDTLEVKVADLEKEVQKQTELRVMYRKRMERTQDYLRYCLQIAQENGILEHIIHTKGELQQSPLYNLNSITNSPLNPTPMHQNHPNLEAIIDQAKINGWYINPTEIQMEEKIGQGSTAEIHRGTWRGFDVAVKCISTEFFRTNANGVEFFAQEVETLSKQRHRFVLHLMGACLDPPNHAWLVTEYLKTTLKEWLHGPGKRRRDRIVSLPSFKERLIRAFEIAQAMQYLHDQRPKIVHRDLKPSNVFLDHDMHVRVADFGHARFLDDGEMALTGETGTYVYMAPEVIRCEPYNEKCDVYSFGVIFNELLTGKHPYIETEYGPAKIAMEVVEGKLRPMFPSGDDGEQLGELIDLIRLCWDGNPSTRPSFATITHILKTYANRLLQF 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02863 450 Pfam Protein kinase domain 174 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02863 450 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 40 447 - -
Car05g02863 450 ProSiteProfiles Protein kinase domain profile. 172 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02863 450 Coils Coil 60 94 - -
Car05g02863 450 ProSitePatterns Protein kinases ATP-binding region signature. 178 199 IPR017441 GO:0005524
Car05g02863 450 SUPERFAMILY Protein kinase-like (PK-like) 148 439 IPR011009 -
Car05g02863 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 301 313 IPR008271 GO:0004672|GO:0006468
Car05g02863 450 Gene3D Transferase(Phosphotransferase) domain 1 275 449 - -
Car05g02863 450 MobiDBLite consensus disorder prediction 1 38 - -
Car05g02863 450 CDD STKc_MAP3K-like 178 440 - -
Car05g02863 450 Gene3D Phosphorylase Kinase; domain 1 160 253 - -
Car05g02863 450 SMART serkin_6 172 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02863 450 PANTHER OS09G0443600 PROTEIN 40 447 - -
Car05g02863 450 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02863 Car-Chr5 73618648 73621764 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02863 134 441 MAP Kinase Kinase Kinase AT5G03730 37.179 2.85e-49 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Car05g02863 Pkinase 4.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02863 - - gmx:100810435 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02863 05 73618648 73621764 Car05g02863 05 73618648 73621764 ECH