Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02858 ATGAGTTTAACCACAGCAAAAGACGATTCATCTTCGGAAATTCACATACCAGCTGAAATCGATTGGCACATGTTAGATAAATCCAAGTTTTTCTTCCTCGGCGCCGCCTTATTCTCCGGTGTCTCCGCCGCACTTTATCCGATGGTGGTTTTAAAAACTCGCCAACAGGTTTCTTCTTCTCATTATTCTTGTCTCAACATGTCATATGCTATCATGCGCCATGAAGGTTTTAGAGGTTTTTACAAAGGTTTTGGTACTTCTTTAATGGGTACTATACCTGCTAGAGCACTTTACATGACAGCACTTGAAGTAACTAAGAGTAACgttgctactgcttttgttgaattgggtttttctgataacactgctactgctatagctagtgctgcagctggtgttacttctgctATGTCTGCACAATTAGTTTGGACCCCAATTGATGTTGTTAGTCAAAGACTCATGGTTCAAGGTACTTGTAGTAATAATGGTGGACGAAATAGTGCTATTTTAGCTAATCTTAATTCTGAGAATTATAGAAATGGTTTTGATGTTTTTAGAAAAATTCTTTATGCTGATGGAGCAAGAGGGTTATATAGAGGATTTGGGATTTCAATTTTGACTTATGCACCATCTAATGCTGTTTGGTGGACTTCTTATTCTATGGTTCATAGGTTTATATGGGGTGCTTTTGGTTCATGTTTGTGTAAAAAGGAAGACAAAGAGAGTGGTAATAGTGGATGTGTTGGTTTTAGGCCTAATTCTAAGGCAATGATTGGTGTACAAGGTTTCAGTGCGGTTGTTGCTAGTGGAGTTTCTGCAATTGTGACAATGCCTTTTGATACAATTAAGACTAGGTTGCAGGTTTTGGATACAGAGGTGAATGGAAGAAAGAGACCTTTAACTTTTGTGCAGACAGTGAGGAATTTGGTGAATGAAGGTGGTTTGTTTGCTTGTTATAGAGGATTGGGTCCAAGGTGGGTTTCAATGTCTATGTCTGCCACAACTATGATTACTACTTATGAGTTTTTGAAACGTATGTCTACTAAGAGGCAAGATTAA 1059 0.3513 MSLTTAKDDSSSEIHIPAEIDWHMLDKSKFFFLGAALFSGVSAALYPMVVLKTRQQVSSSHYSCLNMSYAIMRHEGFRGFYKGFGTSLMGTIPARALYMTALEVTKSNVATAFVELGFSDNTATAIASAAAGVTSAMSAQLVWTPIDVVSQRLMVQGTCSNNGGRNSAILANLNSENYRNGFDVFRKILYADGARGLYRGFGISILTYAPSNAVWWTSYSMVHRFIWGAFGSCLCKKEDKESGNSGCVGFRPNSKAMIGVQGFSAVVASGVSAIVTMPFDTIKTRLQVLDTEVNGRKRPLTFVQTVRNLVNEGGLFACYRGLGPRWVSMSMSATTMITTYEFLKRMSTKRQD 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02858 352 SUPERFAMILY Mitochondrial carrier 23 343 IPR023395 -
Car05g02858 352 ProSiteProfiles Solute carrier (Solcar) repeat profile. 256 346 IPR018108 -
Car05g02858 352 Pfam Mitochondrial carrier protein 263 349 IPR018108 -
Car05g02858 352 Pfam Mitochondrial carrier protein 39 109 IPR018108 -
Car05g02858 352 Pfam Mitochondrial carrier protein 124 227 IPR018108 -
Car05g02858 352 Gene3D Mitochondrial carrier domain 28 352 IPR023395 -
Car05g02858 352 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 352 - -
Car05g02858 352 PRINTS Mitochondrial carrier protein signature 35 48 IPR002067 GO:0055085
Car05g02858 352 PRINTS Mitochondrial carrier protein signature 138 156 IPR002067 GO:0055085
Car05g02858 352 PRINTS Mitochondrial carrier protein signature 198 216 IPR002067 GO:0055085
Car05g02858 352 PRINTS Mitochondrial carrier protein signature 265 287 IPR002067 GO:0055085
Car05g02858 352 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Car05g02858 352 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 225 IPR018108 -
Car05g02858 352 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02858 Car-Chr5 73586101 73587995 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02858 1 352 Chloroplast and Mitochondria Gene Families AT1G72820 64.689 9.69e-162 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02858 K15121 - gmx:100784202 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02858 05 73586101 73587995 Car05g02858 05 73586101 73587995 ECH