Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02854 ATGACGGATAAAAATCCAAGGCCACCAAATTCACTTGACAGCAATTTCACTAATCAGCCTCTGGAGCTCCCTGAGTATTTTAAATTTGATGATGATCAATGGCCAGATGATGAACCAGAGCCATTTGTTTTTGAGCATGTTGTGAACCAAGAAAATCAACAAGCCAATAAATTTGTTGGTGATTTTGGAGGAAGTGGAAGCTACCTTGAAGGGTCTTCTAGCAACGATGTCAGCAGTGAACGTGAGAAGaaggaagttacagataaagttgcattcaaaacccagtcagaggttgaaattctggatgatgggttcaagtggaggaagtatggaaagaagatggtgaaaaacagccccaatccaagGAACTATTATAGGTGTTCAGTGGATGGATGCCAAGTGAAAAAGAGAGTTGAGAGAGATGTGAATGATCCAAGTTATGTAATAACAACCTACGTAGGCACTCATACTCATCCAGGACCTTTTACGCGGATTTTTAAAATTTGCGGCGTGACCTTGAGCATGAAACGAGATTGA 537 0.3203 MTDKNPRPPNSLDSNFTNQPLELPEYFKFDDDQWPDDEPEPFVFEHVVNQENQQANKFVGDFGGSGSYLEGSSSNDVSSEREKKEVTDKVAFKTQSEVEILDDGFKWRKYGKKMVKNSPNPRNYYRCSVDGCQVKKRVERDVNDPSYVITTYVGTHTHPGPFTRIFKICGVTLSMKRD 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02854 178 Pfam WRKY DNA -binding domain 102 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car05g02854 178 MobiDBLite consensus disorder prediction 1 20 - -
Car05g02854 178 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 7 160 - -
Car05g02854 178 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 7 160 IPR044810 GO:0003700
Car05g02854 178 SUPERFAMILY WRKY DNA-binding domain 94 161 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car05g02854 178 SMART WRKY_cls 101 160 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car05g02854 178 Gene3D WRKY domain 85 162 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car05g02854 178 ProSiteProfiles WRKY domain profile. 96 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02854 Car-Chr5 73565467 73569851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02854 12 158 WRKY Transcription Factor Family AT5G26170 48.148 2.66e-40 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car05g02854 WRKY 2.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02854 - - gmx:100819462 233.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02854 05 73565467 73569851 Car05g02854 05 73565467 73569851 ECH