Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02849 ATGTCGGTTGCAGTGCCATTAAGATCAGGTAATTCAGTGTGTGATATTCCAACCATAGCTACCCACATGGATGTTTCCAGACTTAAGCTGATGACAGATACAGGGTTGTTATCAAATGCAATAACTACGATATCCGCTGATACTTTTATAGGTTCTGATGAGGATCATATTAGTGACAATCTAGATCATATTAGTGACAATCTAGACGATGAAGTTTGTATTACAACAGTTGAGCCACCTTTGCATGGGAGAGAAGGGGAAATTCTGTTGTTGAATATGATATCCCAAAATATAAGCACTTCAGTTGTTAGCGACGAACTATTAGCCCCCGAAAATGACGAGGATGATTCGTTATCATTGGATGGAGATCCGATTATTTACAGTACTTCTCTATCGGTAGCCAGTGAGAGTAGTAGTGTTTGCAGAGATGAGTTTATTAGTTCTGAGGATAATTCAGATTTTGGGACAAGGAGTTCCATGGTCATAGATAAGAGCATCTCTGCTGTCAAAATTGTTGCCCCTGGTTTGGACGAGTCAAATGTGGAGGCAGATGTTTTGAGTGAACCCCTTGTGGCTGTAACAGTCAGCCTTGGAGACAAAACAGACATTAGATCTGTCTCGATGCCTACTACTGTTATTCTTCATCAACTGCCTCTTGATAAAGCCGTGAGTGGAACAGTCGGCCGGAGTGTTTTTGAATTGGATTGTACGCCACTTTGGGGAGTTACATCTATATGTGGAAAAAGACCTGAGATGGAAGATGCCGTTGGAATTGCACCACGGATGTTAAAAATTCCTATTCAAATGCTAATAGGTAACCGAATATATGATCGAGTGAACAAGTATTGTAGTCAACAGACAGTTAATTTTTTTGGAGTCTATGATGGCCATGGTGGCTCTCAGGTGGCAAATTATTGTCGTGATCGAATGCATTTGGCCTTAGCAGAGGAAATAGAATTTGTCAAGGAACGTCTAATAATTGGAAGCACCGATTGTCAAGATCAATGGAAAAAAGCTTTCACTAACTGTTTTTTGAATGTGGATGCTGAAGTTGGGGGAAAAGTTAGCTGTGAACCTGTTGCACCAGAAACTGTTGGTTCCACTGCTGTTGTAGCTATTGTTTGTTCGTCTCATATCATAGTTTCAAACTGTGGTGATTCAAGAGCAGTTCTATGTCGTGGAAAAGAAGCCATGGCGTTATCTATAGATCATAAACCAAATCGAGATGATGAATATGCAAGAATCGAGGAAGCTGGTGGCAAGGTGATACAATGGAACGGTCATCGTGTATTTGGGGTTCTTGCAATGTCAAGGTCTATTGGTGATAGATATTTGAAGCCGTGGATTATTCCCGAACCAGAAGTTACGTTCCTCCCTCGTGCAAAAGGTGATGAGTGTCTCATTCTGGCCAGTGATGGCTTGTGGGATGTCATGACAAATGAAGAGGCGTGTGATTTGGCTCGGAGACGCATACTTCTCTGGCACAAGAAAAACGGCTCAGAGCTGTCCTCGATAAGGGGAGAAGGAATTGATCCTGCCGCACAAGCAGCTGCAGAGTACCTATCAAACCGTGCTCTACAGAAAGGAAGCAAAGACAACATCACTGTAATTGTGGTAGATTTGAAATCTCAACGAAAATTTAAGACTAAAACATAA 1656 0.4167 MSVAVPLRSGNSVCDIPTIATHMDVSRLKLMTDTGLLSNAITTISADTFIGSDEDHISDNLDHISDNLDDEVCITTVEPPLHGREGEILLLNMISQNISTSVVSDELLAPENDEDDSLSLDGDPIIYSTSLSVASESSSVCRDEFISSEDNSDFGTRSSMVIDKSISAVKIVAPGLDESNVEADVLSEPLVAVTVSLGDKTDIRSVSMPTTVILHQLPLDKAVSGTVGRSVFELDCTPLWGVTSICGKRPEMEDAVGIAPRMLKIPIQMLIGNRIYDRVNKYCSQQTVNFFGVYDGHGGSQVANYCRDRMHLALAEEIEFVKERLIIGSTDCQDQWKKAFTNCFLNVDAEVGGKVSCEPVAPETVGSTAVVAIVCSSHIIVSNCGDSRAVLCRGKEAMALSIDHKPNRDDEYARIEEAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVTFLPRAKGDECLILASDGLWDVMTNEEACDLARRRILLWHKKNGSELSSIRGEGIDPAAQAAAEYLSNRALQKGSKDNITVIVVDLKSQRKFKTKT 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02849 551 ProSiteProfiles PPM-type phosphatase domain profile. 239 541 IPR001932 -
Car05g02849 551 Pfam Protein phosphatase 2C 269 534 IPR001932 -
Car05g02849 551 SUPERFAMILY PP2C-like 235 543 IPR036457 -
Car05g02849 551 Gene3D - 226 551 IPR036457 -
Car05g02849 551 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 111 551 - -
Car05g02849 551 PANTHER ALPHABET, ISOFORM E-RELATED 111 551 - -
Car05g02849 551 SMART PP2C_4 229 539 IPR001932 -
Car05g02849 551 CDD PP2Cc 241 541 IPR001932 -
Car05g02849 551 ProSitePatterns PPM-type phosphatase domain signature. 290 298 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02849 Car-Chr5 73536901 73540874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02849 2 551 PP2C-type Phosphatase Gene Family AT1G17550 47.163 4.37e-158 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02849 K14497 - gmx:102662702 788.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02849 05 73536901 73540874 Car05g02849 05 73536901 73540874 ECH