Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02846 ATGTCTGTTCAACAGCCAAGTGGTGCACCACAACCACAGAACATAACAATGGTGGCTGTTGACAAAGACAAAAACAGTGCTTATGCTTTCCGATGGGCAATTAATCATCTCGATAATCCTGTCATCGTTGCTGTCCATGTTAAACATAAAAACTTACCTAACCTGGGCACAAATGTTTATCCACCGGATGAAGAGGATGTAGCACTTATTTTCAATAACTTACGTGCAATGTGTCAACGGAAAGCTGTCACAATGAAAGAAGCTGTAATCGATGATCATGATGTTGTGAAAGGGCTTTTAGATTTTGCAAACAGGAATTCCATTCATAGTATTGTTATTGGTGCATCCAACAAGAACCATTTGACAAGTCTTAAAAAATTTAAAGTCTATCATGATATACCAGCAGCCATAATCAAATCAGCACCTGATTATTGTTCTGTATACATAATTTCCAAATTGAAGATTGCGTCAGCTCGATCAGCCGTACGATCAATGGGAAACGGAAACCAGAGTATACCGTCAAAACTACCTGTTCAAGTAGGCCAACATGCTGAATTTGAAACTGGAATAAGGTCAGTACTACCTAGAAGTTCTGTCACTAATGAAGGGTCAGAATCAAGGTCTTTTGACAGCATTACTGCAACAAAAGGCCAGACACGTGAGAGACCGAGGAGTGCAGGTAGCAATTTATCAATGGACAAAATTGATATACCTGGTGGTCGCGGACGACATTGGGCATCGATGGATGAAAGAGACATGGCAGCGCTTGGGCCAATTGATTTGGATGTACCAGATTCCCTCGGGACACCATCGGCTTCCCATACCTCAAAAGATCTTGAAGCTGAGATGAAAAGATTGAGGCGCGAACTGAAGCAAACTATGGACATGTACAGTTCAGCTTGCAAGCAAGCAATCTCAGCCAAAAATCAGGCAGAACAAATTCGTCGATGGAAAGTGGAAGAGGAACGAAAGGTTGAGGAAGTTAGGATGTCTCAAGAGGCAGCTCTTGCAATGGCAGAAAGGGAGAAGGCTAGAGCCAAAGCTGCAATGGAAGCAGCCGAGGATGCAAAGAGGAAGGCTGAACAGGAGGCACAGAGAAGAAGGGAGGCAGAGATGAAGGCGAGGAAAGAGGCAGAAGAGAGGGATCGAGTATTAACTGCATTGGCTCAAAACGATAATCGATATAGAAAATACACAATGGAGGAGATTGAAGTGGCTACTGAGAAATTCTCCCCATCGAAGAAACTAGGCGAAGGTGGATATGGACCTGTGTATAAAGGTCACCTTGATCACACGGCAGTTGCAATCAAACTTTTAAATCCTGAAGCTTCTCAGGGCAGGAAGCAATTCCAACAAGAGGTTGAGGTACTAAGTTGTATTAGACATCCAAATATGGTCCTTCTCCTCGGTGCATGTCCTGAACATGGTTGTTTGGTGTATGAATTCATGGATAATGGTAGCTTAGAAGATAGATTATTTCGGAAAAATAACAGCAGACCTCTTACATGGCAAAAACGGTTCCAAATATCGGCTGAGATTGCAACTGCACTCCTTTTCCTTCACCAAACAAAGCCAGAGCCCATTGTGCACCGAGACCTAAAACCATCTAACATTCTGTTGGACAGGAATTACGTGAGTAAAATCAGTGATGTCGGTCTTGCAAGACTAGTCCCGTCTTCTGTAGTCGACAATGTCACACAATATTACATGACTTCAGCTGCCGGAACCTTTTGTTATATTGATCCTGAGTATCAACAAACAGGAATTTTAACAACAAAATCAGATATATATTCGTTGGGGGTCATGTTACTGCAGGTAATCACAGCCAAGCCTCCAATGGGCCTTGCTCACCATGTCAAGAGAGCGGTTGAAAAGGACAGGATTGTGGAGATTCTTGATCCTGCAGTGACTGATTGGCCAGTTGAAGCAGCTCTATCGTTTGCGAAATTAGCATTGGGTTGTGTAGAGCTCAGCAAGAAAGACAGGCCAAATCTTGCAACAGTTGTTTTGCCAGAGCTTAACAGGTTAAGAGATCTTGGATGTACTGATAACATAGTTTTTACTGATACTAAGAACAATAGCCATTCACCACGCCCTCCAATGCCGACCTGA 2112 0.4299 MSVQQPSGAPQPQNITMVAVDKDKNSAYAFRWAINHLDNPVIVAVHVKHKNLPNLGTNVYPPDEEDVALIFNNLRAMCQRKAVTMKEAVIDDHDVVKGLLDFANRNSIHSIVIGASNKNHLTSLKKFKVYHDIPAAIIKSAPDYCSVYIISKLKIASARSAVRSMGNGNQSIPSKLPVQVGQHAEFETGIRSVLPRSSVTNEGSESRSFDSITATKGQTRERPRSAGSNLSMDKIDIPGGRGRHWASMDERDMAALGPIDLDVPDSLGTPSASHTSKDLEAEMKRLRRELKQTMDMYSSACKQAISAKNQAEQIRRWKVEEERKVEEVRMSQEAALAMAEREKARAKAAMEAAEDAKRKAEQEAQRRREAEMKARKEAEERDRVLTALAQNDNRYRKYTMEEIEVATEKFSPSKKLGEGGYGPVYKGHLDHTAVAIKLLNPEASQGRKQFQQEVEVLSCIRHPNMVLLLGACPEHGCLVYEFMDNGSLEDRLFRKNNSRPLTWQKRFQISAEIATALLFLHQTKPEPIVHRDLKPSNILLDRNYVSKISDVGLARLVPSSVVDNVTQYYMTSAAGTFCYIDPEYQQTGILTTKSDIYSLGVMLLQVITAKPPMGLAHHVKRAVEKDRIVEILDPAVTDWPVEAALSFAKLALGCVELSKKDRPNLATVVLPELNRLRDLGCTDNIVFTDTKNNSHSPRPPMPT 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02846 703 Gene3D Phosphorylase Kinase; domain 1 388 482 - -
Car05g02846 703 SUPERFAMILY Protein kinase-like (PK-like) 394 669 IPR011009 -
Car05g02846 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 528 540 IPR008271 GO:0004672|GO:0006468
Car05g02846 703 ProSiteProfiles Protein kinase domain profile. 410 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02846 703 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 17 124 - -
Car05g02846 703 Pfam Protein kinase domain 412 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02846 703 Gene3D Transferase(Phosphotransferase) domain 1 483 687 - -
Car05g02846 703 MobiDBLite consensus disorder prediction 191 244 - -
Car05g02846 703 CDD STK_N 18 152 - -
Car05g02846 703 PANTHER OS02G0152300 PROTEIN 15 688 - -
Car05g02846 703 Pfam Universal stress protein family 17 123 IPR006016 -
Car05g02846 703 Coils Coil 276 303 - -
Car05g02846 703 CDD STKc_IRAK 416 676 - -
Car05g02846 703 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 15 688 - -
Car05g02846 703 MobiDBLite consensus disorder prediction 355 378 - -
Car05g02846 703 Gene3D HUPs 16 151 IPR014729 -
Car05g02846 703 MobiDBLite consensus disorder prediction 193 226 - -
Car05g02846 703 SMART serkin_6 410 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02846 703 Coils Coil 329 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02846 Car-Chr5 73506297 73510427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02846 85 680 Receptor kinase-like Gene Family AT5G12000 56.390 0.0 679
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Car05g02846 Pkinase 2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02846 - - gmx:100798861 905.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02846 05 73506297 73510427 Car05g02846 05 73506297 73510427 ECH