Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02843 ATGGGTGCCTCTGGAAAATGGGTCAAAGCACTAATCGGATTCAAGAAACCTGACAAGGATGAACATGGGAAGGAAGGAGGTAAGAGTAAGAAGTGGAGGTTATGGAGAAGTTCATCAGGAGATAATGGTTCATGGAAAGGTTTGAAAGGAAACCACCATAAAGCAGTTTCTGAATGCTCTGAATCTCCAACCGCAGCAGAAGCTTTCACCGCCGCAGTAGCAACCGTCGTTAGAGCTCAACCTAAGGATTTTAGACTTGTTAGGCAAGAATGGGCTGCTATTCGAATTCAAACTACTTTCCGCGCTTTCTTGGCACGAAGGGCTTTGAGGGCTTTGAAGGCAGTGGTGAGGATCCAAGCTCTTGTCCGGGGTAGACAAGTGAGGAAGCAAGCTGCAGTGACATTGAGATGCATGCAGGCCTTAGTTCGTGTTCAAGCTCGAGTAAGAGCTCGTCGTGTGAGGATGTCTATGGAAGGACAAGCCGTACAGAACATGCTCAATGAGCGGCGCAGCAAGCTTGAACTTTTGAAGGAAGCAGAGGAAGGGTGGTGTGATAGCATAGGAACATTGGAAGATGTTAAATCAAAATTACAAATGAGGCAAGAAGGAGCTTTCAAAAGAGAGAGGGCAATTGCATACTCTCTTGCACAGAAGCAGCAATGCAGGCCAACCTCAAGCACTAATTTGCGAACAAATGCCTCGTTTTCGTCTCTCAAGAATCACGAGATGAACAAAGCTAATGGGGGATGGAGTTGGTTGGAAAGATGGATGGCAGCCAAGCCTTGGGAGACTAGGTTGATGGAACAACAATCTCACGCTGAAAGCTTAGATAAAACCCCCCCACCACCTCCAAAGAAATTTGTGGAATCCATTGTAAGCTCTAATTCAAAACCGTGCTCAGTCAAAATCAAGAAGAATAACGTCACAACCAGGATTTCTGCTAAACCTCCTCCACACATTGGACAAGCTACTCGTTCGTCCTCGAGTCCAAGTTCCGAGTTTCGGTATGATGAGAGTTCTGCATCATCTTCTATTTGTACATCCACAACACCAATATCAGTGAACACTTGTGAAAGGACTGAGGATAGTAGTAACTACACTAGGCCAAGTTACATGAATCTGACTCAGTCAACCAAGGCAAAGTTGAAAACGGGAAATCAAATGTATAACCGAGCTCAAAGGCAACAATCAATGGATGAATTTCAATTTATGAAGAGGGCTGCAGTTTTTTCTAATGGAGATTCTAAAAGCATTGCTGCTTCTGATCATTCACTCAACTTTTCTAGGCCACTTCACCTACCAACTCACTTGGACAAGAGTTCGGTGAGGCCACGGTGA 1338 0.4499 MGASGKWVKALIGFKKPDKDEHGKEGGKSKKWRLWRSSSGDNGSWKGLKGNHHKAVSECSESPTAAEAFTAAVATVVRAQPKDFRLVRQEWAAIRIQTTFRAFLARRALRALKAVVRIQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSMEGQAVQNMLNERRSKLELLKEAEEGWCDSIGTLEDVKSKLQMRQEGAFKRERAIAYSLAQKQQCRPTSSTNLRTNASFSSLKNHEMNKANGGWSWLERWMAAKPWETRLMEQQSHAESLDKTPPPPPKKFVESIVSSNSKPCSVKIKKNNVTTRISAKPPPHIGQATRSSSSPSSEFRYDESSASSSICTSTTPISVNTCERTEDSSNYTRPSYMNLTQSTKAKLKTGNQMYNRAQRQQSMDEFQFMKRAAVFSNGDSKSIAASDHSLNFSRPLHLPTHLDKSSVRPR 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02843 445 Gene3D - 87 138 - -
Car05g02843 445 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 444 - -
Car05g02843 445 MobiDBLite consensus disorder prediction 17 35 - -
Car05g02843 445 SMART iq_5 111 132 IPR000048 GO:0005515
Car05g02843 445 SMART iq_5 88 110 IPR000048 GO:0005515
Car05g02843 445 ProSiteProfiles IQ motif profile. 113 140 IPR000048 GO:0005515
Car05g02843 445 ProSiteProfiles IQ motif profile. 89 117 IPR000048 GO:0005515
Car05g02843 445 PANTHER IQ-DOMAIN 5-RELATED 1 444 - -
Car05g02843 445 MobiDBLite consensus disorder prediction 320 348 - -
Car05g02843 445 MobiDBLite consensus disorder prediction 17 49 - -
Car05g02843 445 MobiDBLite consensus disorder prediction 306 348 - -
Car05g02843 445 Pfam IQ calmodulin-binding motif 113 130 IPR000048 GO:0005515
Car05g02843 445 Pfam IQ calmodulin-binding motif 91 110 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02843 Car-Chr5 73472333 73475119 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02843 1 439 IQD Protein Family AT2G26180 61.086 1.01e-150 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02843 - - gmx:100799714 624.394